Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02554 |
Symbol | |
ID | 6776314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2776825 |
End bp | 2777643 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755994 |
Product | SeqA protein |
Protein accession | YP_002126844 |
Protein GI | 196157355 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3057] Negative regulator of replication initiationR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0871258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCCTC TTAAAAAGGA AGTAGTTATG AAAAGCATTG AAATAGATGA CGATTTATAT GCCTTCATCG CCAGCCAGAC TAAGCATATT GGTGAGAGTG CATCACAAAT TTTAAGACGT TTACTGTTAC CAGAAGACGG CGCAATATCA GGCAGCGCTG AAGCAAGCGG TAACGAATCA AAAGGTGACG CTTCAGACCA AGCAAAAACA AGTGAAATAA AAAGCGCTGG TGGGGAAGAG AAAACGAACG AGCCCAGTGT TGAAGTCAAG GCTGCACCGA AGGCTCAGGC TCAAACTGTG AGTACTGCTA AAAAAGCGCC AGCCAAACCC GCGGCGAGAA AAACTACCGC GAAAACGACG GCGAAGAAAA CACCTGTGAG AGCGGCGGCA ACAAAAGCCC CAGCCAAGCC TGCTACAAAA GCGTCGTCGA CCGTGGCATC GTCGGTAGAA ACAGAAACCC ACAACAAGCG CGACATTCTT GATGCTGTAT CTAAAGATGC GTTAGCCACG TTTACTAAAC GGGTCGATCA GTTTCTGTTT GTTTTAAGTG CAGCGCACAA GCTTAATGCA GAAAACTTCT CTAGCGTAGA AAGTATCAAA GGTAAAAACC GTACGTACTT TGCAACAAGT AAAGAAGCCT TGCTTGAAAA TGGCAGCAGT ACAAACCCTA AAGCCATTCC CGATAGCCCT TTCTGGGTAG TAACAAACAA CAATACTGCC AAGAAAACGA ATATGCTGGA ACAAGTTTTG CGTAACTTGG GTTATCAGCC CGATGTTGTT GAGACGGTAA CAGCGCGTTT TACATCAGAG GGTAAGTAA
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Protein sequence | MVPLKKEVVM KSIEIDDDLY AFIASQTKHI GESASQILRR LLLPEDGAIS GSAEASGNES KGDASDQAKT SEIKSAGGEE KTNEPSVEVK AAPKAQAQTV STAKKAPAKP AARKTTAKTT AKKTPVRAAA TKAPAKPATK ASSTVASSVE TETHNKRDIL DAVSKDALAT FTKRVDQFLF VLSAAHKLNA ENFSSVESIK GKNRTYFATS KEALLENGSS TNPKAIPDSP FWVVTNNNTA KKTNMLEQVL RNLGYQPDVV ETVTARFTSE GK
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