| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02539 |
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| Symbol | |
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| ID | 6777184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2761057 |
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| End bp | 2762421 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755979 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_002126829 |
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| Protein GI | 196157340 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000365945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAAGCG CAGCTAAAGT AGCGCCAATA ACGGAAACCT GTATGGATAA TTTATCTTAT
TTAACTGGCT TTAATAACGA GCACGAAACT GAAGCCCTGC CCGGCGCTCT TCCTAAAGGG
CAATTTAGCC CACAGAAAGT TAATTATAAG CTTTATGCTG AGCAATTTAG CAGTACCGCT
TTTACTGCAC CACGGGCAGA CAACCGTCGA AGCTGGACGT ACCGACTACG CCCTTCTATT
GCCATGGGCG ACTTTAAAAA AATAGATAAT GGCCTTGTGC GCACGGCACC TGAAACGGAT
ATCCCCTGCC CACCCAATGT GATGAGATGG GACCCAATTC CATTGCCTGA CAGCGAGTGT
GACTTTATTG ATTCGCTTGT CACTATCGCC ACTAACGGCG ACGCTAAAAC ACAAACGGGT
ATGGGAATAC ACTGTTACAG CGCCAATATG GATATGCAAA ATCGTGTGTT CTATTCATCT
GACGGTGAGA TGCTTATCGT CCCCCAATTA GGTGACATGC TGATTACCAC TGAGTTTGGA
AAGCTTCATG TCTCGGTAGG TGAAATAGTG GTGATCCCTC GCGGTGTACG CTTTGCTGTC
AAACCATTAG GCGGCCCCAT ACGGGGTTAC ATTTGTGAAA ATTACGGGCA TCCGTTTGTT
TTACCAGAAC GCGGCCCTGT TGGTGCTAAC GGCTACGCTA ATCAGCGGGA CTTTTGCTAT
CCCACGGCGT GGTTCGAGGA TAATGACACG CCACACACCA TGGTAAACAA GTTTTGCGGC
AACCTATTTG AGGCCCCCCT TGATCATTCT CCGTTTGACG TAGTGGCTTG GGTAGGTAAC
TCTGCACCTT ACAAATACAA CCTATCGCGC TTTAACGTAA TAAACACAGT AAGCTTTGAT
CACCCCGACC CCTCGATTTT TACTGTGCTG ACTTCCCCAT CCGATCTTGA AGGCACAGCT
AACGTTGACT TTGTTATCTT CCCACCGAGG TGGATGGTAG CCGAGAACAC CTTCCGTCCA
CCCTATTATC ATAGAAATGT GATGAGTGAG TTTATGGGGC TAATAGAGGG CATGTACGAT
GCAAAAGAGC ATGGTTTTGT GCCGGGCGGG ATGAGCTTGC ATAATTGTAT GACGCCCCAT
GGCCCTGAAG CTGAAGTGTT CGATAAGGCA TCGAATGCCG AACTTACTCC CCAGCGCTAT
GAAAACACCC TAGCGTTCAT GTTTGAATCT CGTTATCCCA TTGCGCCACG GCGTTTGCTA
TGCATAGCGA CTTCGCAGAA TGATTATCTT TCTTGCTGGA AGGGCCTACA AAACACTACG
ATGGTGAAAT GCCTAAGCAT AATTATGACG CAAGTTTTGA AGTAA
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| Protein sequence | MLSAAKVAPI TETCMDNLSY LTGFNNEHET EALPGALPKG QFSPQKVNYK LYAEQFSSTA
FTAPRADNRR SWTYRLRPSI AMGDFKKIDN GLVRTAPETD IPCPPNVMRW DPIPLPDSEC
DFIDSLVTIA TNGDAKTQTG MGIHCYSANM DMQNRVFYSS DGEMLIVPQL GDMLITTEFG
KLHVSVGEIV VIPRGVRFAV KPLGGPIRGY ICENYGHPFV LPERGPVGAN GYANQRDFCY
PTAWFEDNDT PHTMVNKFCG NLFEAPLDHS PFDVVAWVGN SAPYKYNLSR FNVINTVSFD
HPDPSIFTVL TSPSDLEGTA NVDFVIFPPR WMVAENTFRP PYYHRNVMSE FMGLIEGMYD
AKEHGFVPGG MSLHNCMTPH GPEAEVFDKA SNAELTPQRY ENTLAFMFES RYPIAPRRLL
CIATSQNDYL SCWKGLQNTT MVKCLSIIMT QVLK
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