Gene MADE_02484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02484 
Symbol 
ID6778711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp2698572 
End bp2699006 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content47% 
IMG OID642755923 
ProductTranslation initiation factor 3 
Protein accessionYP_002126774 
Protein GI196157285 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00212518 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCGC TAGCAGAAGC TACGCGTACC GCTGAAGAAG CGAGCCTAGA TCTAGTAGAA 
ATCAGTCCGA ATGCCGAGCC GCCAGTCTGT AAAGTTATGG ACTATGGCAA ATTCCTCTTC 
GAAAAAAGTA AAGCTCAAAA AGAGCAGAAG AAAAAACAAA AGCAAATTCA GGTCAAGGAG 
ATTAAATTTC GCCCTGGCAC TGATGAAGGC GATTACCAGG TAAAACTGCG CAACCTGCGT 
CGCTTTCTTG AAGGTGGTGA CAAAGCCAAA GTTACGATCC GCTTCCGCGG TCGTGAAATG 
GCGCACCAAG ACATCGGTAT CGATTTGCTA AACCGCGTTA AAACGGATTT AGAAGAAATC 
GCTACATGCG AGTCTTTCCC ACGCCGTGTG GAAGGCCGTC AGATGATCAT GGTGCTAGCC 
CCAAATAAGA AGTAG
 
Protein sequence
MVSLAEATRT AEEASLDLVE ISPNAEPPVC KVMDYGKFLF EKSKAQKEQK KKQKQIQVKE 
IKFRPGTDEG DYQVKLRNLR RFLEGGDKAK VTIRFRGREM AHQDIGIDLL NRVKTDLEEI 
ATCESFPRRV EGRQMIMVLA PNKK