Gene MADE_02452 details

Gene Information

• Locus tag: MADE_02452
• ID: 6778427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 2660422
• End bp: 2662341
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 642755891
• Product: putative lipopolysaccharide modification acyltransferase
• Protein accession: YP_002126742
• Protein GI: 196157253
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1835] Predicted acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.102125
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTTCA TCACTAGCCT TTATGTGTAT AAAATTAAGA AAAATAAATT CTCACAACAG 
GTAAAACAAA AAATGACATT CAGGGAAGAC ATTCAAGGCT TGCGAGCATT AGCTGTATTG 
AGTGTAGTCA TATATCATAT CAGCCCTCAC CATTTACCTG GAGGCTTCAT AGGCGTAGAT 
ATATTCTTTG TTATATCTGG TTATCTCATC ATGGGGCAGA TATACAATAA AATTCAGCAA 
AACGCGTTTT CTATTTCAGA CTTTTACGTA AAACGCTTTA AACGCTTATT TCCCGCTTTT 
TTTGCGACAG TTTCAGTATC TTCTTTATTC GCTTTTTCAT ACTTCCTTCC CGGAGAATTT 
AGTAAATACA CGTGGAGCTT AGTGGCCTCT TGTCTTTATA TTTCAAATTT TTACTTTTAT 
ACCAAATCAG GCTATTTCGA TAGCGAACTA CAAGGTTCTC CTCTGCTACA TACTTGGTCG 
CTTTCGGTTG AAGAACAATT TTATGCATTC ATGCCAATAA TTTTGATACT TGCTTATGGG 
GCATATAAAA GGTTTTCTAT TGCTATTTTA AGTACCATTG GCGCATTGAG TTTTATTGGG 
TGTGTTTATT TAACTCATAG TGATGTTAGC TTTGCGTTTT TCGCGTCATT TACAAGGTTT 
TGGCAATTTA TTTTAGGAGG GGCTATAGCT ATTTATGGCT TACACTTGAA AAGCCATCGC 
ACTCTTTGCG AATTATTGAC AACTATTAGT GTAATTACTC TCCTCGCAAG CTGCTTTTTT 
CTCACTCACG ATGAGTTTCC TGGAATAAAA GCTGTTATTC CTACATTAGC TACAGTTGCC 
GTGCTTGCCT TTTCAAGAAA GGGTTTATTC ATCTACCGAT TATTATCAAT TAAGCCTGCA 
GAATTTATAG GTAATATTTC GTATTCTCTC TACCTATGGC ATTGGCCTGT TATAATCTTC 
TATCAACTTC ATCTTGAAAC AGAACTGAAA GCACTAGATA AAATTATTGT ATTGATCCTT 
TCAATTTTAC TAGGTGTGCT TTCATATTAC TTTGTTGAAC AACGTTTTAG GAAATCAAAA 
AACAGTAAAG GAGTTGCACA AAAAGTATAC CTGCAAGTTG CCTTATCTAG CGCAATACTA 
TGCGCTGTAG TTTATGGTTT AACTTATGTT TTGCCCATGC GCTTCAACGA ACAGCAATTA 
GCCTATGAGG AATTCATGGA CAATCATGAT GCGTCTTACT TTAGGCCTGG CGTATGCTTT 
TTAACAAGTA GTTATTCTGA CATTTCCTAC TTCAAAAAAG ACACTTGCTT AATTGCTCAA 
GAAGAAAAAG AAAACATTCT ATTGGTAGGC GATAGCCATG CCGCACACTG GTATGCCGGT 
TTAGAAGCGA ATAAAAAGCC CAATCAAACG GTAAGTCAAA TAACAGCCAG TGGTTGCAAG 
CCTACTATAA GCTACCAAGG TGAAAAGCGG TGTGCTCAGT TAATGCGCAT TGCGTTTGAG 
GAGATAATTC CGACTCGAAG ATATGAAAAG ATCATTATTT CTGCTAGATG GAAAATCGAC 
GACTTACCGT GGCTACTGAA AACACTGGAC AGAATAGATA CCGCGAATAC TGAAGTGACC 
GTGCTAGGAC CAATTATTGA ATACACGCAA CCCCTTCCGC GTATATTGGC CCATAGTGAT 
TTTGAAGACA AACTAAAGCG AACGCAAAAG TATGAGTTTA TTGAGAAAAT AGACTCAAAG 
TTTAAAAATG AGCTTAGAAA TAAAAACGTA AAATATATAT CGATTTTTAA AAATATTTGT 
GACAGCACTG GCAATTGTAA AACGCTTGTA GGCGACAAGC CGCTTCAATT TGACTATGGG 
CATTTAACGC TTGAGGGCTC ACGCACGCTA TTAAATAGGC AATCGAATAT TAGTCTGTAA 

 

Protein sequence

MLFITSLYVY KIKKNKFSQQ VKQKMTFRED IQGLRALAVL SVVIYHISPH HLPGGFIGVD 
IFFVISGYLI MGQIYNKIQQ NAFSISDFYV KRFKRLFPAF FATVSVSSLF AFSYFLPGEF 
SKYTWSLVAS CLYISNFYFY TKSGYFDSEL QGSPLLHTWS LSVEEQFYAF MPIILILAYG 
AYKRFSIAIL STIGALSFIG CVYLTHSDVS FAFFASFTRF WQFILGGAIA IYGLHLKSHR 
TLCELLTTIS VITLLASCFF LTHDEFPGIK AVIPTLATVA VLAFSRKGLF IYRLLSIKPA 
EFIGNISYSL YLWHWPVIIF YQLHLETELK ALDKIIVLIL SILLGVLSYY FVEQRFRKSK 
NSKGVAQKVY LQVALSSAIL CAVVYGLTYV LPMRFNEQQL AYEEFMDNHD ASYFRPGVCF 
LTSSYSDISY FKKDTCLIAQ EEKENILLVG DSHAAHWYAG LEANKKPNQT VSQITASGCK 
PTISYQGEKR CAQLMRIAFE EIIPTRRYEK IIISARWKID DLPWLLKTLD RIDTANTEVT 
VLGPIIEYTQ PLPRILAHSD FEDKLKRTQK YEFIEKIDSK FKNELRNKNV KYISIFKNIC 
DSTGNCKTLV GDKPLQFDYG HLTLEGSRTL LNRQSNISL