| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02435 |
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| Symbol | |
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| ID | 6778332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2637913 |
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| End bp | 2639328 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755874 |
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| Product | lipoprotein releasing system transmembrane protein LolE |
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| Protein accession | YP_002126725 |
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| Protein GI | 196157236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.487659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTATC CTGTTTCTGC ATTCATTGCC TATCGTTATG CTAAATCTAG CAAATCAAGC
CAAACCAGTT TTGTCTCTTT CATTAACCGA TTCTCGGTAG CCGGCATTGC CTTAGGCTTA
ATGGCACTAA TCATCGTAGT GTCGGTAATG AACGGCTTAG AGGGCCAGCT AAAACAACGT
GTTTTAGGCA TCGTGCCGCA CATTGAAATT ACAAAGACAC CCACCGAAAT TACGAAGACA
CCCACGACAA CAAGTAAAGA CGCAACACTT ACAAAGACAC CCATCGTAAA CAAACAAACC
CAAAAGCTTA CAGAGACACC CATCTCAACA TTAAGTAAGC CTCCCATTTC TGAAGACGAT
AGCTCGAAGC TTACAAAGAC ACCCACCGTA AGCCCTCAAT CTCAATCGGC TATGACAGTA
GACGCGCTTA GCAAGACACC CATCAAAGGG GTGGTAGCAA GTATGGCATA TCGAGAAACT
GAAGCTGTCG TTCAGTCACG CTCAGATCTA CGCGGCGTTC AAGTTCACGG TGTCGAGCCC
GGCGTGATGC TAGAGCATAC TCTTGTGGCA AATCACATGG AGCAGGGAAG GTTTAACGAT
TTAGTAGAAG GAAGTTTTTC TGCCATTATT GGGCGTGCCC TTGCCATAAA ACTTGATGCG
AGGGTTGGCG ACAGGCTTCG CGTAATGGTG GCAGGGGCAA GCGTTTATAC GCCCTTTGGG
CGAATGCCGA GTCAACGCTT AGTAACAATC GTGGGTGTCT TCGATATGGG GTCGCAAATG
GATGACAAGG TTATGTATAT GAACCTAAAA GATGTCAACC GGTTGATGCG CGACCCAAAA
GGCAACGGGC GGTCGCTACG TTTGTTTTTA AACGATGCGT TTAACTATTT AGCGGTGGTT
GATCATTTAA CCGATACGAT GGGTGTCTCT GTAAGTACTA TCAGAACGTG GCGTGAGCGC
CAAGGGCCAT TATTTGATGC GGTGAAGATG GAAAAAAACA TGATGACGCT TATGCTGCTG
CTAATAATAG CGGTAGCGGC ATTTAACATT GTGTCTGCGC TGGTGATGGT AGTAACTGAA
AAGCAAGGTG ATATTGCCGT ATTGCAAACA CAAGGCATGC TACCTGGAAC TGTTATGTGG
ATTTTCGTAC TTAACGGATT GTTTAACGGC ATAAAAGGAG CCGGCATAGG CCTTATATTA
GGCGTCGTTA TTACGCTTCA ATTGAATAAC ATTTTGGATT TGATTGGTTC GCCATTAGCA
CTTGCGGCCG ATGGAAGCGG TTTGCCTGTA GAAATGGATG CTATACAAAT TGCTGGTATT
GCATTGCTCT CGTTGCTTCT TTGCGTGCTT GCAAGCGTGT ATCCGGCGCG AAAAGCAATG
AAAATAGCCC CATCTCAAGC ACTTCAAAAC GAATAA
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| Protein sequence | MFYPVSAFIA YRYAKSSKSS QTSFVSFINR FSVAGIALGL MALIIVVSVM NGLEGQLKQR
VLGIVPHIEI TKTPTEITKT PTTTSKDATL TKTPIVNKQT QKLTETPIST LSKPPISEDD
SSKLTKTPTV SPQSQSAMTV DALSKTPIKG VVASMAYRET EAVVQSRSDL RGVQVHGVEP
GVMLEHTLVA NHMEQGRFND LVEGSFSAII GRALAIKLDA RVGDRLRVMV AGASVYTPFG
RMPSQRLVTI VGVFDMGSQM DDKVMYMNLK DVNRLMRDPK GNGRSLRLFL NDAFNYLAVV
DHLTDTMGVS VSTIRTWRER QGPLFDAVKM EKNMMTLMLL LIIAVAAFNI VSALVMVVTE
KQGDIAVLQT QGMLPGTVMW IFVLNGLFNG IKGAGIGLIL GVVITLQLNN ILDLIGSPLA
LAADGSGLPV EMDAIQIAGI ALLSLLLCVL ASVYPARKAM KIAPSQALQN E
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