Gene MADE_02406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02406 
Symbol 
ID6778004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2605735 
End bp2607390 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content47% 
IMG OID642755845 
Producthypothetical protein 
Protein accessionYP_002126696 
Protein GI196157207 
COG category[L] Replication, recombination and repair 
COG ID[COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.122562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGCG TAACAATAAG TTTCGATAAA TCTAGAACCT ATATCAACCT AATGCTCAAC 
CCGTCTGAAT TCACCTCAGA AGTAGACATA CGGGAAATAA AAAAGCAGTT AGAAAGCGGC
GAAACCAAAC GTATTTACGT TTCAGAAAAA GCGCTCAAAT CTGCCTGTGA CACGGCCAAC
CATTACTTTA AAACGGGTGA TGGGACTATC GTTCAAGAAC GAATTGGCGA ACGTAAAAAC
GCGGAAGTAG AATTCCGTGT TCCTGATGAC GGCATGCACG CGAACCTTGT GCTCACTACT
CCCTATGGCG GAAAGCTACC CGCGTTAAGC ACGATAAAAT CACTGGCAAT AAAAAATAGA
GTCATCCGAG GTGTAAGCAC CAAAAAGATA GAATCTATGC TGAGTAATGC TAGGCGCGCT
GAGCCCGGCA CCGTGCTGGA AGAAACTATC GCGAAAGGGC TTCCTGCTAA AAATGGCAAA
AACTCTAAGT TCATTCCTCT TGTTCCTAAC GCCCTAGAAC GGGTGTTAAA GCCTCAGGCA
GATGACGGCG AGCGCGTAGA CATGCGCAAC TTAGGCGAAA TTATTTGTGT AAAAGTAAAC
ACGCCTGTGC TGCGTCGTAC CGCGCCAACC CAAGGTCGCT CTGGTTTCGA CGTAAAAGGC
AATAAACTCC CTGCCGTCGC AGGCGAGTGG GTCGACTTTA AAATGGGAAG CGGAACCGTT
GTGTCAGACG ACGATGCCAA CCTTTTGATG TCGGCCATTT CGGGTATGCC TAAGTATCGC
GACCAAATTA TGAATATCGA TGACACCTTC ATCTGCAATG GCGTTAACGT GGGTACTGGG
CATGTGAATT ACGAGGGAGC GGTACTTGTA AACGGCGATG TAACAGAAAA AATGCAGATT
AAAGCGGCCG GTGATGTAAC CATAAATGGT TTTGTTGAGT CGGCGCATAT TGAAGCGGGT
GGCGATATCA TTATCACCGA AGGCGCTATG GGTAAGGTGA ATGATTCTCA AGGCGAGTTC
CAATGTAAAT TAGTCGCATC AGGAAGCATC CACGTGCAGC ACGGCCAGGG CATTGACATT
CAATGCGGTG GAAACATTAC CGTAGGCAGG CAACTGGCCT ACAGCCGCTT GCGTTGCGGG
GGAGCCGTTA TCGTAGGGCA AATTGACAAG CCTATGGGGA ACCTTTTTGC TTGCGATATA
ATAAGTCAAG ATCGCGTGGA GGCAGGCACC CTAGGGGCCG TTTCCGGCAG TACGTTGAAA
GTGGACTTTA GCCCGGGCTT TAATCAACTC CTTGAACGAA AAGACTCGCT AGATGAATTG
CTACGCCAGA TTCGCGAGAA CAATTTAAAG CACAAAGAGA AAATAGCACT TATCCAAGGT
AAGAAAATTC CAAAAGAACT TCGGCACAAA GCCGCTGAGG CTTTAGAACT TTTCAACAAT
GAAAGCGCGC TGCTAGAGTG GCTTGAAAAT AAAGCCAATG ATGTGAAGTC GGCTAAAGAA
AGCTACCAGT CCGACATTAA GCTTATCGCC AATAAACGGC TTTACCCTGG CGTATCGGCT
AAGTTAAATA ACAGAAACTG GCGTTCAGAG CGTGAATACG ACCGTGCGCA AATACACTAC
GACGCTCATC AATGGCACTA TGAGCCGTTG ATATAA
 
Protein sequence
MNGVTISFDK SRTYINLMLN PSEFTSEVDI REIKKQLESG ETKRIYVSEK ALKSACDTAN 
HYFKTGDGTI VQERIGERKN AEVEFRVPDD GMHANLVLTT PYGGKLPALS TIKSLAIKNR
VIRGVSTKKI ESMLSNARRA EPGTVLEETI AKGLPAKNGK NSKFIPLVPN ALERVLKPQA
DDGERVDMRN LGEIICVKVN TPVLRRTAPT QGRSGFDVKG NKLPAVAGEW VDFKMGSGTV
VSDDDANLLM SAISGMPKYR DQIMNIDDTF ICNGVNVGTG HVNYEGAVLV NGDVTEKMQI
KAAGDVTING FVESAHIEAG GDIIITEGAM GKVNDSQGEF QCKLVASGSI HVQHGQGIDI
QCGGNITVGR QLAYSRLRCG GAVIVGQIDK PMGNLFACDI ISQDRVEAGT LGAVSGSTLK
VDFSPGFNQL LERKDSLDEL LRQIRENNLK HKEKIALIQG KKIPKELRHK AAEALELFNN
ESALLEWLEN KANDVKSAKE SYQSDIKLIA NKRLYPGVSA KLNNRNWRSE REYDRAQIHY
DAHQWHYEPL I