| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02385 |
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| Symbol | |
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| ID | 6776353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2572530 |
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| End bp | 2574488 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755824 |
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| Product | TPR domain protein |
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| Protein accession | YP_002126675 |
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| Protein GI | 196157186 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.761952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAG AAGATATCCA ACATGAAATA CGCGCTATTA AACAAGCGCT GCAACGCGCT
CAATTCTTAT TAGCCAATGA ACGCGTTGAT CACCTATTGT CCACGTCGCT TAGCGAGCAG
CAACGCTTAG AAGTCCATTA TCTTGCAGCG GTTACACATA GAATGGCAAA GCAATATGAT
GAGGCCTTTC GTCATATCGA CGTACTGCTT TCACTTTCTC CTGATTACGG CAGGGCGTAT
CAAGAGCTTG CTTATTGTCA TGAAGCGAAG GGTAACGGTA AAGAAGCGTC GAGCGCGTTT
TTTAAAGCAA CGCATTTTAA TCCCGCGCTG ATCAGCAGTT GGAAAAAACT GCTGTCAATT
TATCAACGTC ACAATGATGT CACTGCGGTA CAAATGGCAA CCAAGCAAAT AGCGCACTTG
CAGTCGCTAC CAGCGCCTGT ATTAGGGGCT TACGACCTTA TGTACGAAAA GCAGTTCGCT
GCTGCAGAGC AGGTATGCCG GCAGTTTCTG ACCAAGCACA AGCATCACCC CGAAGCAATG
ATGCTACTTG CTGAAATAGG CATGCAACTC AAGGTTTATA GCGACGCTGA GTTTCTTTTA
GAAAGCTGTG TTGAGCTTTA TCCAGATAAT GAAAAAGCAG CCTTAGCCTA TCAAAATGTG
CTGTCTAAGT TAGGCAAGTT TCCAGAGGCG GTACAAGTGG CCCGCCAAAG GTTAGAGCAT
AACCCCACTA GCTTTAGTAT AAAAACCAGC TTGGCCCATG CGCTTGTTGG TGTAGGGCAA
TTAGATGAGG CCATTACTGT TTACCGTGAT GTACTTGCAG AAAACCCGGA TAGACCCAAA
GTGTGGGTAT CGCTTGGCCA TGCGTTAAAA GCAAAAGGGG ATACGCCTGA TGCGGTTAGT
GCGTACGAAA AGGCCATAGA CTATGCCAGT GACTACGGCG ACGCCTATTG GAGCCTCGCA
AACACGAAAA CCTATAAGTT TAGTGACGCA CTACTTGCGC AAATGTCTGA ACAGCTAAAC
AGCAATGCTA TAAAGTTAGA AGATAAAATA CATGTGTGCT TTGCACTAGG TAAAGGGCTT
GAAGACCGGG GAGAGGCTAG CAAAGCCTTC AATTATTACC AGCAAGGTAA CAGCTTAAAG
CGCAGCACCC TTCAATTTGA TATTGCAAGG ACAGAGGAAG CGCTAAACGC ACAGCAGCGC
GCTTTCTCAA GTGAAGACTT TAATAAAGTA GAAGGTTGCC AAGCGCCTGA CCCTATCTTT
ATTGTCGGCT TGCCGCGTGC AGGCTCAACG TTATTGGAGC AAATTCTCGC GTCACACTCA
AAAGTCGATG GCACCATGGA GCTTCACGAT ATATTGGGCA TTGCTTCATC GTTAAGTCAT
CAAAAGACGC CTTATCCATT GAACGTTAAT GCGTTAGATG GAGAAACGCT TGAAAAGCTT
GGCGCGCGTT ATATCGAGCA AACTCGTGCT TACCGACAAG GCGCGCCATT GTTCATCGAT
AAAATGCCCA ATAACTTTAT TCATATTGGC CTAATTAAGA AGATACTGCC TAACGCTAAA
ATTATCGATG CGCGAAGAAA TCCTATGGAC TGCTGCTTTA GCGGCTTTAA GCAGCTATTC
GGTGAGGGGC AGGAATTTAG TTACTCGCTT TCCGATATTG GGCGCTATTA CAAAGCTTAT
GAAAAGCTTA TGGATCACTG GCACGCGGTG CTGCCGGGGG AGATTCTTAC CGTACAGCAC
GAAGAGGTAT TAGACGATTT AGAAGGCCAA GTCAGACGTA TCTTAGATTT TTGTGGGTTA
GACTTTGAAG AAGCGTGTTT AGCATTTCAC CAAACCAAGC GGGTTATTAA AACGCCGAGT
TCTGAACAGG TTCGCCAACC TATCTACAAA ACAGGAATGG GGCAGTGGAA ACCTTTTGAG
GTATATTTGT CGGCGCTTAA AGAGGCGTTG GGTAAATAA
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| Protein sequence | MTPEDIQHEI RAIKQALQRA QFLLANERVD HLLSTSLSEQ QRLEVHYLAA VTHRMAKQYD
EAFRHIDVLL SLSPDYGRAY QELAYCHEAK GNGKEASSAF FKATHFNPAL ISSWKKLLSI
YQRHNDVTAV QMATKQIAHL QSLPAPVLGA YDLMYEKQFA AAEQVCRQFL TKHKHHPEAM
MLLAEIGMQL KVYSDAEFLL ESCVELYPDN EKAALAYQNV LSKLGKFPEA VQVARQRLEH
NPTSFSIKTS LAHALVGVGQ LDEAITVYRD VLAENPDRPK VWVSLGHALK AKGDTPDAVS
AYEKAIDYAS DYGDAYWSLA NTKTYKFSDA LLAQMSEQLN SNAIKLEDKI HVCFALGKGL
EDRGEASKAF NYYQQGNSLK RSTLQFDIAR TEEALNAQQR AFSSEDFNKV EGCQAPDPIF
IVGLPRAGST LLEQILASHS KVDGTMELHD ILGIASSLSH QKTPYPLNVN ALDGETLEKL
GARYIEQTRA YRQGAPLFID KMPNNFIHIG LIKKILPNAK IIDARRNPMD CCFSGFKQLF
GEGQEFSYSL SDIGRYYKAY EKLMDHWHAV LPGEILTVQH EEVLDDLEGQ VRRILDFCGL
DFEEACLAFH QTKRVIKTPS SEQVRQPIYK TGMGQWKPFE VYLSALKEAL GK
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