Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02368 |
Symbol | mnmA |
ID | 6776598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2556281 |
End bp | 2557390 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755807 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_002126658 |
Protein GI | 196157169 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00392033 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA TTGAATCTAA CGCCAGCAAA AAAGTAATCG TCGGCATGTC CGGCGGAGTC GATTCTTCTG TTTCAGCCTA CCTGCTTCAA CAACAGGGTT ACCAGGTTGA AGGCCTTTTC ATGAAAAACT GGGAAGAGGA TGACAACGAT GAATACTGCG CTGCAGCGGA AGATTTAAAA GATGCGCAGG CGGTAGCTGA TAAACTAGGT ATTGAGCTAC ACACTATTAA TTTTGCTGCT GAATACTGGG ATAACGTGTT TGAGTATTTC TTAGAGGAAT ACAAAGCCGG CCGTACGCCA AACCCAGACA TCATGTGTAA CAAAGAAATC AAGTTTAAAG CGTTTCTAGA ATTTGCAGCC GAAGACCTTG GCGCTGACTA CATTGCTACC GGTCACTACG TGCGCCGCAG AGAGGTAGAC GGCAAATGGC AGATGCTTCG CGGTTTAGAT AACAACAAAG ACCAAAGTTA TTTTCTTTAC ACGCTTGGCG AAGAGCACGT TGCTAAAACC CTTTTCCCGG TTGGCGATAT CGAAAAGCCA TTAGTTCGCA AAATTGCTGA AGAGCAAGGT CTTATCACCC ATGATAAGAA AGACTCTACA GGGATTTGTT TTATCGGCGA GCGCAAGTTT AAAGATTTTC TAGCGCGGTA CCTTCCCGCT CAACCTGGGG TTATTGAAAC CGCAGAGGGT GAAGAAATTG GCCAGCACGA AGGCTTGATG TACCACACAC TAGGTCAGCG TAAAGGGCTA CACATTGGTG GTTTGGCGAA ATACGGTGAC GACCCTTGGT ATGTAGTTGA TAAAGATGTT GCTCGCAACG TGCTTATTGT GGGCCAAGGT GCCGACCACC CTCGCCTTTA CTCTAAAGGC TTGGTAGCAA AACAGCTGCA CTGGGTAGAT AGAAAAACGA TTACAGAGCC TATGCGCGCT GTAGTTAAAA CCCGTTATCG TCAGGCCGAT ATCCCTTGTA CAATAACGCC GACTCAAGAC GACACCATTG AAGTGATGTT TGATGAGCCA CAAAAGGCGG TAACGCCGGG GCAATCTGCG GTATTTTATA TTGATGAAGT ATGCCTTGGT GGCGGTATTA TTGAGAGTTA TATTCGCTGA
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Protein sequence | MSDIESNASK KVIVGMSGGV DSSVSAYLLQ QQGYQVEGLF MKNWEEDDND EYCAAAEDLK DAQAVADKLG IELHTINFAA EYWDNVFEYF LEEYKAGRTP NPDIMCNKEI KFKAFLEFAA EDLGADYIAT GHYVRRREVD GKWQMLRGLD NNKDQSYFLY TLGEEHVAKT LFPVGDIEKP LVRKIAEEQG LITHDKKDST GICFIGERKF KDFLARYLPA QPGVIETAEG EEIGQHEGLM YHTLGQRKGL HIGGLAKYGD DPWYVVDKDV ARNVLIVGQG ADHPRLYSKG LVAKQLHWVD RKTITEPMRA VVKTRYRQAD IPCTITPTQD DTIEVMFDEP QKAVTPGQSA VFYIDEVCLG GGIIESYIR
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