Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02354 |
Symbol | |
ID | 6777663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2540967 |
End bp | 2542307 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642755793 |
Product | succinylarginine dihydrolase |
Protein accession | YP_002126644 |
Protein GI | 196157155 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3724] Succinylarginine dihydrolase |
TIGRFAM ID | [TIGR03241] succinylarginine dihydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0061994 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGT TTGAAGTTAA CTTTGACGGT CTAGTAGGCC CAACCCACAA TTATGCCGGT TTGTCTTTCG GTAATGTGGC TTCCCTGAAC AACGCCAATG CAGTAAGTAG CCCTAAACAG GCAGCTAAAC AAGGCTTGGC TAAAGCGAAG GCCCTAGCTG ATATGGGTAT GATGCAGGGT GTGTTAGCAC CGCAAGAGCG CCCAGATATT GCAGCATTGC GTCGCCTTGG CTTCACCGGT AATGATGCAC GTGTGCTAGA AAGCGCTGCA AAGCAGTCTC GCGAGATTTT TCTTGCTTGT TGCTCTGCCA GTAGCATGTG GACCGCAAAT GCTGCCACTG TGTCTCCTAG CGCCGATACT GCCGATGGAC GTGTTCACTT TACCCCTGCA AACTTGACGA ATAAGTTTCA CCGTTCGCTC GAACCACAAG TGACCGGTAA TATCCTGCGT GGCACCTTTG CCAATGAAAA ACACTTCGCT CACCATCAAC ACCTGCCAGA TAACGAACAT TTTGGCGATG AAGGTGCAGC CAATCATACG CGACTTTGCA GTAACTATGG ACAAGCTGGC GTAGAATTGT TTGTTTATGG CCGTCATGCT TTTGATACCA GTAAGCCTGC GCCAACAAAG TACCCTGCCC GTCAAACCCT TGAAGCATGC CAAGCCGTTG CGCGTTTGCA TGGTCTGGAT GACGATGGCG TAGTTTACAT GCAGCAGAAT CCAAACGTTA TAGACCAAGG CGTATTCCAT AACGACGTCA TCGCTGTAGG TAATCAAAAC GTGTTGTTCT TCCACGAACA GGCGTTTTAT CAAAAAGACG CGGGCTTAAA AGAACTTCAA GCAAAATTTG GCAGTGAGCC GCTTCATTTC ATTGAAGTTC CAACGTCAGA AGTGTCGGTA TTAGACGCGG TTAAAACATA CTTGTTCAAC ACCCAAATCA TTACCCTTCC AAATGGCGAC ATGACCATTA TAGCGCCAAC TGAATGTCAG GAAAATGAAG CGGTTAAACG CTACTTAGAC AAAGTGGTAA CGCTAGGCAC GCCCATTAAG TCGGTCAACT ATTTTGACGT AAAACAAAGC ATGCGCAACG GTGGCGGCCC GGCTTGCTTA CGCCTGCGCG TAGCAATGAA CGACCAAGAA CTTGAGGCCG TTAATCAGAA CACATTAATT AACGACACTC AGTTTGCTCG CTTAAACACA TGGGTAGATA AGCACTATCG CGATGAATTA CGCGAGGATG ACTTGCGCGA CCCGCAGTTG CTAATTGAAT CTCGCACCGC CCTAGATGAG CTTACGCAAA TTCTTAAGAT TGGCTCGGTT TACCCGTTCC AGCAGGGGTA A
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Protein sequence | MKQFEVNFDG LVGPTHNYAG LSFGNVASLN NANAVSSPKQ AAKQGLAKAK ALADMGMMQG VLAPQERPDI AALRRLGFTG NDARVLESAA KQSREIFLAC CSASSMWTAN AATVSPSADT ADGRVHFTPA NLTNKFHRSL EPQVTGNILR GTFANEKHFA HHQHLPDNEH FGDEGAANHT RLCSNYGQAG VELFVYGRHA FDTSKPAPTK YPARQTLEAC QAVARLHGLD DDGVVYMQQN PNVIDQGVFH NDVIAVGNQN VLFFHEQAFY QKDAGLKELQ AKFGSEPLHF IEVPTSEVSV LDAVKTYLFN TQIITLPNGD MTIIAPTECQ ENEAVKRYLD KVVTLGTPIK SVNYFDVKQS MRNGGGPACL RLRVAMNDQE LEAVNQNTLI NDTQFARLNT WVDKHYRDEL REDDLRDPQL LIESRTALDE LTQILKIGSV YPFQQG
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