Gene MADE_02330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02330 
Symbol 
ID6779023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp2517321 
End bp2517989 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content48% 
IMG OID642755769 
Productthymidylate kinase 
Protein accessionYP_002126620 
Protein GI196157131 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGAA AGTTTATTGT AGTAGAAGGC CTTGAAGGGG CAGGAAAAAG CTCGGTAATC 
GGGTTGATTG TAAAAGCGTT AACAGACGCT GGAATGCGCG TGGAGCAAAC TCGTGAGCCG 
GGCGGTACCC CAATGGCTGA AGCGATTAGA GAGTGTGTTA AGCACGACTG GGACGAAACA 
GTAAGCGAAG AAACCGAATT ACTGCTTATG TATGCGGCTC GCGTTCAGTT ACTGACCAAT 
AAAATTTACC CTTCGCTTAA CGCAGGTGCT TGGGTGGTGG GAGACAGGCA TGATCTTTCT 
TCGCAGGCTT ATCAAGGCGG AGGCCGAGGT GTCAGTGAAA AAACCATGAC CGCAATTAGC 
GATATTGCTC TTAACGGGTT CAAGCCAGAT TTAACCCTTT ATCTAGACGT AGACCCAGCC 
GTGGGTTTAG AAAGAGCGCG TGGTCGCGGC GAGCTTGATC GAATTGAGCA AGCGGGTTTA 
GGCTTTTTTG AGCGTACGCG GGCCAGATAT TTATCCTTGG CTGAAAATGA TGAGAGCATC 
ATTGTTGTTA ATGCTATGCA GCCCATGGAA CAAGTGCATC AAGATGTCAT TTCCATTATT 
GCTAATTATG TAAGCCAGCA CATTGACGAA GGTAGCGAGT CGCACAAAAC CGATCAGGGG 
AATAACTAA
 
Protein sequence
MRGKFIVVEG LEGAGKSSVI GLIVKALTDA GMRVEQTREP GGTPMAEAIR ECVKHDWDET 
VSEETELLLM YAARVQLLTN KIYPSLNAGA WVVGDRHDLS SQAYQGGGRG VSEKTMTAIS 
DIALNGFKPD LTLYLDVDPA VGLERARGRG ELDRIEQAGL GFFERTRARY LSLAENDESI 
IVVNAMQPME QVHQDVISII ANYVSQHIDE GSESHKTDQG NN