Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02309 |
Symbol | |
ID | 6779111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2493451 |
End bp | 2494359 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755743 |
Product | Zn-dependent enzyme from deacylase/carboxypeptidase superfamily protein |
Protein accession | YP_002126599 |
Protein GI | 196157110 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0981929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAA TTTATCCAAT AGGCACTCTA GGCAAGCCAT GGGGCAATGA AGAAAAAGCA CAGTGGAAAG CACAGCAGTC GGTGAAGCGA AGTTATCAGG AAGAGGTGCT TGATAAACTT AGCAAAATTG TTCCTGAAGG TTTTCAGTTA AAGCAATATG GTGCATTACC TTATGACGAA GCGCGTTACC CATTGTATGC TGTTGTCCCA ATAAATATTG ACTCTAATAA GCCTTCTGCG CTTATCACAG GCGGTGTGCA CGGCTATGAA ACGAGCGGTG TACAAGGAGC CCTTCAGTTT ATTGAAGCGA AGCTGGCTAC TTTTAAAGAC TTATTTAATA TCGTGGTTGT TCCGTGCGTT AGCCCCTGGG GCTATGAAAC AATAAACAGA TGGAATCCGC TAGCGTTAGA TCCTAACCGT TCCTTCTACC CGGGCTCTCC CGCTACAGAA TCAGCTCAAC TGATTAAACT AGTGAATGAA TTGGCTCTAC CTTTAGCGCT TCACATCGAT TTGCACGAAA CTACCGACAC AGACAACAGT GAGTTTAGAC CCGCACTAGC TGCTCGAGAC GGAGTAACGC ATGATAACTG GAACATCCCT GATGGTTTTT ACACGGTAGC CAATACATCC AACCCTCAGC TAGAATTTCA AAAAGCGGTC ATTGATGCGG TTAAGGACGT AACCCATATT GCGCCTGCCG ATGAGAACGG CAAAATAATT GGTGCTGATG TAGTGAGTGA AGGTGTTATT TGCTATGACA AAAAGGCGCT ATCGCTTTGT GGCGGGTTGA CCGACGCAAA GTACGTCACT ACTACTGAGG TGTATCCCGA TAGCGATAAT GCGACGCCTG AGAACTGCAA TGAAGCACAA GTGTCAGCGA TATGCGCCGC ACTGAACTTT ATTAAATAG
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Protein sequence | MQQIYPIGTL GKPWGNEEKA QWKAQQSVKR SYQEEVLDKL SKIVPEGFQL KQYGALPYDE ARYPLYAVVP INIDSNKPSA LITGGVHGYE TSGVQGALQF IEAKLATFKD LFNIVVVPCV SPWGYETINR WNPLALDPNR SFYPGSPATE SAQLIKLVNE LALPLALHID LHETTDTDNS EFRPALAARD GVTHDNWNIP DGFYTVANTS NPQLEFQKAV IDAVKDVTHI APADENGKII GADVVSEGVI CYDKKALSLC GGLTDAKYVT TTEVYPDSDN ATPENCNEAQ VSAICAALNF IK
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