Gene MADE_02266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02266 
Symbol 
ID6775821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2431879 
End bp2432646 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID642755700 
Productputative 3-hydroxybutyrate dehydrogenase 
Protein accessionYP_002126556 
Protein GI196157067 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAC GCACAGTATT TATTACAGGC GGTGCAAGCG GTATTGGTTT GGGGATTGCG 
GAAGCGATGA TGAAACAGGG TCACCATGTG ATCATCGCTG ACATCAATGA ACAGGCCGCG
AAAGAAGCAG TAATTAAACT TGCGCATTTA GAGGGTTCGG CCAGTGCGGT GGCTGTTGAT
GTGTGTGACG CACAACAAGT CGCAGCTTTG CCAGAAGTAC TGGGCAAACA CACTGTAGAT
GTACTGATTA ATAACGCGGG AATTCAGCAC GTTTCTCGCA TTGAAGATTT TCCAGCGGAT
AAATGGCAGC AGCTGATTAA TATTATGCTG GTAGGCCCCG CCCTTCTGAC TCAAGCATTT
TTACCGGCAA TGCGCGAGCA AAACTACGGC CGCATTATTA ATGTTGGCTC AATCCATTCT
TTGGTGGCCT CGCCTTACAA GTCTGCCTAC GTGGCAGCCA AACACGGGCT GTTGGGCTTT
TCAAAAACCA TTGCCCTTGA AACCGGTGAC TGTGATATCA CTATCAATAC CCTTTGCCCG
GCCTACGTAA AAACACCGCT TGTCGAGCAG CAAGTTGCCG CACAGGCTAA AGAGAATAAT
TTGACCGAAG AAGAGGTGAT AACAAAAATC ATGTTAGAGC CCATGCCTAA AAAGCAATTT
GTGAGTGTTG AAGAGCTTGC TGATACCGCA AGTTTTTTGA TGTCGCCTAG CGCGCGTAAT
ATAACCGGGC AAACTATGGT GCTAGATGGA GGTTGGACCG CGAGATAA
 
Protein sequence
MNRRTVFITG GASGIGLGIA EAMMKQGHHV IIADINEQAA KEAVIKLAHL EGSASAVAVD 
VCDAQQVAAL PEVLGKHTVD VLINNAGIQH VSRIEDFPAD KWQQLINIML VGPALLTQAF
LPAMREQNYG RIINVGSIHS LVASPYKSAY VAAKHGLLGF SKTIALETGD CDITINTLCP
AYVKTPLVEQ QVAAQAKENN LTEEEVITKI MLEPMPKKQF VSVEELADTA SFLMSPSARN
ITGQTMVLDG GWTAR