| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02137 |
|---|
| Symbol | |
|---|
| ID | 6775862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2305329 |
|---|
| End bp | 2305631 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642755575 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_002126431 |
|---|
| Protein GI | 196156942 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00401129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACTG GTAGTTACGT AGCACTCGTC ACGCCGATGT TCGAAAACGG CGATATTGAT
TACAAGTCTT TAGAGAAACT TGTGAAGTTT CATGTAGAGC AGGGCACCCA CGGTATAGTG
TCGGTTGGAA CTACTGGTGA GTCAGCAACC CTACCGTTTG ATGAGCACAT TAACGTGGTC
AAAGAAACAG TAGCTATGGC ATCGGGCGCG ATCCCGGTGA TAGCAGGCAG CGGAGCAAAC
TCTACTGCAG AGGCCATTTT CTTACTGAGC AACTCGGCTC AACGGGTATC GACGGCTTTT
TAA
|
|---|
| Protein sequence | MFTGSYVALV TPMFENGDID YKSLEKLVKF HVEQGTHGIV SVGTTGESAT LPFDEHINVV
KETVAMASGA IPVIAGSGAN STAEAIFLLS NSAQRVSTAF
|
|---|
| |