| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02101 |
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| Symbol | |
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| ID | 6776050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2269200 |
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| End bp | 2270105 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642755538 |
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| Product | probable transcriptional regulator, LysR family protein |
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| Protein accession | YP_002126395 |
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| Protein GI | 196156906 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0550958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGAT TGACCCTGTT AAAAACGTTT GTGGTAGTCG CAAATGAAGG CAGCTTTACT
AAAGCCGCGG TACGCTTAGA TACATCGAAC CAGCTTGTAA GCAAATATGT TGCACAGCTT
GAAAAGCACT TAGATACTAG GCTGTTTAAT AGAACAACCC GAAAAATTCA TCTTACAGAG
GCGGGGCGTC AGTGTTTGCA ACACGCAAAC CATATTCTTG AAAGCATTAA TGATATGGAA
AGCCAGCTAG GCCTTTTTAA CACGCAGGCC AAAGGTACTT TACATGTCAG TGCGCCCGTA
TCCTTTTCTA CTTTACATTT AGCAGGGGCA ATAGGGGCTT TTCAACACGC TCACCCACAT
GTATCGATTA ACTTGCAGCT TAACGACCGC AAGATTGATG TGATTGACGA AGGGTTTGAC
GTTGCAATAC GCGCCGGTCA TCTTGCCAGC TCTAGCTTAG TGGCTAAAAA GATCACCACT
ATTAATTTAG CGCTATGCGT GTCACCCGCA TACCTTAAAA AGTATGGTCG TCCCTTACAC
CCAAGCGACT TAAAGCCCGA GCACTATTTA GAATACTCGT ATGTAAATTA TGACAATAAT
CAGTCAGAAC TTATTGCTGC GTTAAAAGCT AACGCCCAAA AGTCGCCTCC AAAGCTCACC
GCAAATAATG GAGAGGTGCT GACAAATGTG GCTAAGCAAG GTGAAGGCTA TGTGCTTCAA
CCTACCTTTA TAGTTGGCGA AGCTTTAAAA AAAGGAGAGC TAGTTTCTAT ACTTGACGAG
TATATTCCTC AGTCTATCGC TCTGTATGCG GTATACCCAC ACCGAAAATT AATATCAAAT
AAGCTGCGGG TTTTTATCGA CTTTCTTTGC AACTACTTTG AAGACACTCC TTTTTGGGAT
AGGTAA
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| Protein sequence | MDRLTLLKTF VVVANEGSFT KAAVRLDTSN QLVSKYVAQL EKHLDTRLFN RTTRKIHLTE
AGRQCLQHAN HILESINDME SQLGLFNTQA KGTLHVSAPV SFSTLHLAGA IGAFQHAHPH
VSINLQLNDR KIDVIDEGFD VAIRAGHLAS SSLVAKKITT INLALCVSPA YLKKYGRPLH
PSDLKPEHYL EYSYVNYDNN QSELIAALKA NAQKSPPKLT ANNGEVLTNV AKQGEGYVLQ
PTFIVGEALK KGELVSILDE YIPQSIALYA VYPHRKLISN KLRVFIDFLC NYFEDTPFWD
R
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