| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02027 |
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| Symbol | |
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| ID | 6776012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2193166 |
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| End bp | 2194407 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755462 |
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| Product | putative RND efflux system protein |
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| Protein accession | YP_002126323 |
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| Protein GI | 196156834 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAT CTGTTCAATC TGCCAATGCA CAAAAGTCTT CAATCACGCT TGAAAATGCG
CTCAAACGCA CATTATCAAA CAACCCAGAT TTAATTGTGT TCGAATTTAA ATCTTCGGCT
TTGGATGGTG AATCAAAAAT GGCCAGCTTA CGACCTGAAA TGTCAGTTGG GGTTGAAGTT
GAAAATGTGT TGGGAACAGG CGAAGTGTCT GGTATCAGAG ATGCCGAATT GACACTGACC
CTATCGTCGG TCATCGAACT GGGCGATAAA ATCAGCAGCC GAGTGAATGT GGTGAGTACA
AAAAAAGCAC AACTGCTTTC TCAACGGCGC ATTCGTACGC TGGACATCCT AGGTGAAACA
ACTCGACGAT ATATCAATGT CATTGTCCAA CAAGCGTTGC ACAAGACTGA GCAACGAGCT
GAAATGCTGG CTCGCACAAT GCTTCAGACA GTCACTACAC GGGTTGAAGC GGGAGCCTCT
TCACCACTTG AGAAAAAACG TGCAGAGTCA GCGTTGTCGC AGGCGCGTTT GTCGTTATTG
ATAAGTGAAC AAAAACTCAA TGAGTATAAA CGCGACCTGG CCATCATGTG GGGTGACACT
ACCGCTGAGT TTACAGAAGT TGAAGGGACA CTGTTATCGT TTCCAAATTC ACTATCACTT
GAGCATATCC TTTTACAGCT TCAAAGCAAT CCACACGTTC TGCTTTATGC TGATAACTAT
CGGGTACAAG AGGCCAGATT GAGAGTGGTT CAGGCCAGTC AGCAGTTCGA CATTGCGTGG
GAAGCCGGTA TCCGAAGAAT GCAGGGAATT GATGACACAG CGTTAGTCGC CAGTATTTCG
GTGCCGTTAA ATACCAAGCA GCGGAATCTA GGTGAATACG AACAACAGCG CGCATTGCTT
GACAGTATAG ACTATCAAAA ACAAGCGAAA ATTCGTGAAC TCACTCGCCA ATTAAATCAA
GTCATTAGCG CAAAAGACCA AGCCTTGCTC ACTGTTACGA CCCTTCAAGA CAATGTCGTC
CCAACATTGG AATCTGCATT GAAATTGGCG CGGGATGGCT ATGAAAGTGG TCGCTACAAC
TATATAGAGT GGGTGACAAC GCAACAGCAA CTCATAGATA TGCAACGAAC ACTGATAAAA
GCCGCAGGCT TAGTTCACCT TCGAAGCGCA GATCTGGAAG CACTTACAGG TCTTCCAATT
TTTACGACGT CCCCGTCGAC TTCTGCTCAA TCATCACAAT GA
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| Protein sequence | MSISVQSANA QKSSITLENA LKRTLSNNPD LIVFEFKSSA LDGESKMASL RPEMSVGVEV
ENVLGTGEVS GIRDAELTLT LSSVIELGDK ISSRVNVVST KKAQLLSQRR IRTLDILGET
TRRYINVIVQ QALHKTEQRA EMLARTMLQT VTTRVEAGAS SPLEKKRAES ALSQARLSLL
ISEQKLNEYK RDLAIMWGDT TAEFTEVEGT LLSFPNSLSL EHILLQLQSN PHVLLYADNY
RVQEARLRVV QASQQFDIAW EAGIRRMQGI DDTALVASIS VPLNTKQRNL GEYEQQRALL
DSIDYQKQAK IRELTRQLNQ VISAKDQALL TVTTLQDNVV PTLESALKLA RDGYESGRYN
YIEWVTTQQQ LIDMQRTLIK AAGLVHLRSA DLEALTGLPI FTTSPSTSAQ SSQ
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