Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01999 |
Symbol | |
ID | 6779225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2157334 |
End bp | 2157789 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642755436 |
Product | GAF domain-containing protein |
Protein accession | YP_002126297 |
Protein GI | 196156808 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.130438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGAAC CACAGTACAG CCAGTTAATC AATCAAGCTA AAAGCTTGGT TTCTGGTGAA CACGACCTTA TCGCCAATAT GGCCAATATC AGTGCGCTTT TATTCAACCA CCTTGAAGAA GTGAATTGGG CTGGTTTTTA TCTTTACAAA GAAGAACAGC TGGTATTAGG TCCGTTTCAA GGTCAACCCG CATGTATTCG TATTCCATTA GGGAAAGGCG TTTGCGGTAC AAGTGCAAGT ACTCGTACCG TACAGCGTAT TGCTGATGTC CATCAGTTTG AAGGTCATAT TGCATGTGAT GCAGCATCAA ACTCGGAAAT TGTCGTTCCT CTTGTGCTAA ATGACAGCCT TGTTGGTGTA CTTGATATCG ACAGTCCTGT ATTTGAACGT TTTACAGAAG AAGACGAAAA AGGGCTTGTT GAAATTGCTC AAATTCTTAT GGATTCGCAG AAATAG
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Protein sequence | MKEPQYSQLI NQAKSLVSGE HDLIANMANI SALLFNHLEE VNWAGFYLYK EEQLVLGPFQ GQPACIRIPL GKGVCGTSAS TRTVQRIADV HQFEGHIACD AASNSEIVVP LVLNDSLVGV LDIDSPVFER FTEEDEKGLV EIAQILMDSQ K
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