Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01913 |
Symbol | |
ID | 6775849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2061273 |
End bp | 2062190 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755349 |
Product | metalloendopeptidase-like membrane protein |
Protein accession | YP_002126211 |
Protein GI | 196156722 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0631175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTCT CCCAATCAGG TAATGCATTG ATAAAAAAAA CCGCAAGCTT AGTTATCTCG GCCATGGCAT GCACGTTAGC TTTTGGCTTA TTGCCTTCGC CATCTGTGGC GACGACAACT GAAGCATCCA ATGATTTACG TAACAAAGCT TCGAATGATA TTGCTGTTTC TCTTAACGGT AAATTTACCC AGGGGGCACT TTTACGCGGC CAGGCGCCGG TTGAGTCAAA AGTTTTTCTA AACGGTAAGC CGGTACCTAC CAATAAAGAT GGAAAATTTG TCGTTGGGTT TGAAAGAGAG GCGCCGCTTC AACAAACCCT TACCGTTGAG TATGGGGGTG GGAAAACGTG GCAACGAGAA ATTACACTAG AAAAGCGCGA ATACAATATC CAACGCATCG ACGGTTTAGC GCAAAAAATG GTAACGCCGC CTGCTGAAGT CACGGCGCGT ATTAAACAAG ATAATATAAA CGTGGCTAAT GCGCGCAGCG TTAATTCGGA TCTCGACGCG CTTTTTACTC GGTTTGAGTG GCCGGCGAAA GGCGTTATCT CAGGGGTTTA TGGTAGCCAG CGCATTTTAA ACGGGGTACC TAAGTGGCCA CACTATGGGC TGGATATAGC GAACGAAACA GGAACGCCTG TGTATGCACC AGTAGACGGC GTTGTGACCA TGGCAGACGA CCTTTATTAT TCAGGCAATA CACTTATTCT TGATCATGGC ATGCGTGTGT TTTCTACATT TCTGCACATG GATACAATAA CAGTAGACGT GGGTGAAAAG GTTAAACAAG GCGAGCAGAT CGGTACTATC GGGACAACAG GACGCTCTAC AGGTCCGCAC TTAGATTGGC GTATAAACTT AGGTAAAATG CGCCTTGATC CTCAAACGAT TATCTCTGGC TCCCCTGAAA CCCAATAA
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Protein sequence | MRLSQSGNAL IKKTASLVIS AMACTLAFGL LPSPSVATTT EASNDLRNKA SNDIAVSLNG KFTQGALLRG QAPVESKVFL NGKPVPTNKD GKFVVGFERE APLQQTLTVE YGGGKTWQRE ITLEKREYNI QRIDGLAQKM VTPPAEVTAR IKQDNINVAN ARSVNSDLDA LFTRFEWPAK GVISGVYGSQ RILNGVPKWP HYGLDIANET GTPVYAPVDG VVTMADDLYY SGNTLILDHG MRVFSTFLHM DTITVDVGEK VKQGEQIGTI GTTGRSTGPH LDWRINLGKM RLDPQTIISG SPETQ
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