| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01876 |
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| Symbol | |
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| ID | 6779198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2007910 |
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| End bp | 2009421 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755312 |
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| Product | dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex |
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| Protein accession | YP_002126174 |
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| Protein GI | 196156685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0026892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTG AGATAAAAGT TCCGGTTCTA CCTGAGTCAG TTGCCGATGC CACCATTGCA
ACCTGGCACG TTAAGGCCGG TGACGCAGTT AAACGAGACC AGAACCTGGT TGATATTGAA
ACTGATAAAG TGGTTTTAGA AGTTGTGGCG CCAGCGGACG GTACAATTGG TGAGATCCTA
AACGAAGAGG GTGCAACAGT TTTAGGCGAG CAAGTAATCG CAAAGCTAGA GAAGGGCGGC
GCAGCTGCAG CTTCTGAGCC GAAAGCTAAG AGTGAGTCTA AAGAAGAGTC TAAAGAAGAA
GCTACTCCAG CGGCTTCTGG CAAAGCATCT GACGTGAAAG TACCTGTTCT TCCAGAATCT
GTTGCTGATG CAACTATTGC TACTTGGCAT GTTGCGGTAG GCGAAGCGGT GTCTCGTGAC
CAAAACTTGG TTGACATTGA AACTGACAAG GTCGTACTTG AAGTGGTAGC GCCTGCAGAT
GGTTCTCTTG CAGAAATCAT CGCTGAAGAA GGTGCAACAG TAACAGCTGA AGAAGTTATT
GCCAAGTTTG TTGAAGGCGC TGCAGGCGGT GCATCAGCAC CAGCGTCTTC AGAAGAGAGT
GATGACAACG ACGAAAGCAG CGATGCGCTT AGCCCATCTG TACGTCGTCT CCTAGCTGAG
AAAGGCGTAG ATGCGTCTAA AGTTAAGGGT ACGGGCAAAA ATGGCCGTAT CACTAAAGAG
GACGTTGAAA AGTATCTTAA AGGTGGTGAC AGTGCTCAAA AATCAGCGCC TGCATCAACT
GAGTCAGCGC CAGCGGAATT GCCAACGGGT AACCGTACAG AGAAGCGTGT ACCTATGACG
CGTCTTCGTA AAACAATTGC TAATCGTCTT CTTGAAGCGA AGAACTCAAC GGCAATGTTG
ACTACGTTTA ACGAAGTCAA CATGAAGCCT ATTATGGACC TTCGTAAGCA GTATCAAGAA
AGCTTCGAGA AGCGTCACGG TATTCGTCTT GGCTTTATGT CTTTCTACGT GAAAGCCGTA
ACTGAAGCGC TTAAGCGTTT TCCTGAAGTT AATGCGTCTA TCGACGGTGA TGACATCGTT
TATCACAACT ATTTCGATGT ATCGATTGCT GTTTCTACAC CGCGTGGCCT TGTGACACCA
GTACTTAAAG ATACTGACAC ACTGGGTATG GCGGGTGTTG AAAAAGGAAT TAAGGAACTA
GCACTTAAAG GCCGTGACGG TAAGCTGTCA CTCGCTGAAC TACAAGGTGG TAATTTCACA
ATCACCAACG GTGGTGTGTT TGGTTCACTA ATGTCTACAC CAATCATTAA CCCGCCACAA
AGCGCAATTC TTGGTATGCA CAAAATCCAA GATCGCCCAA TGGCAGTTAA TGGCAAAGTA
GAAATTCTAC CAATGATGTA CCTAGCGCTT TCTTATGACC ACCGTATTAT CGATGGTAAA
GAATCGGTAG GGTTCTTGGT AACCGTTAAA GAGATGCTAG AAGATCCAAC ACGTCTATTA
CTAGACGTTT AA
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| Protein sequence | MTIEIKVPVL PESVADATIA TWHVKAGDAV KRDQNLVDIE TDKVVLEVVA PADGTIGEIL
NEEGATVLGE QVIAKLEKGG AAAASEPKAK SESKEESKEE ATPAASGKAS DVKVPVLPES
VADATIATWH VAVGEAVSRD QNLVDIETDK VVLEVVAPAD GSLAEIIAEE GATVTAEEVI
AKFVEGAAGG ASAPASSEES DDNDESSDAL SPSVRRLLAE KGVDASKVKG TGKNGRITKE
DVEKYLKGGD SAQKSAPAST ESAPAELPTG NRTEKRVPMT RLRKTIANRL LEAKNSTAML
TTFNEVNMKP IMDLRKQYQE SFEKRHGIRL GFMSFYVKAV TEALKRFPEV NASIDGDDIV
YHNYFDVSIA VSTPRGLVTP VLKDTDTLGM AGVEKGIKEL ALKGRDGKLS LAELQGGNFT
ITNGGVFGSL MSTPIINPPQ SAILGMHKIQ DRPMAVNGKV EILPMMYLAL SYDHRIIDGK
ESVGFLVTVK EMLEDPTRLL LDV
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