Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01861 |
Symbol | |
ID | 6775480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1991366 |
End bp | 1992823 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755297 |
Product | MiaB-like tRNA modifying enzyme YliG |
Protein accession | YP_002126159 |
Protein GI | 196156670 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.322164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTAG AAACGTTTGA TCCAAACAAA GTCGCAAACA AAACCACAAC GCTTGAAACA CCGGTCAAAG TACTGAGTGA CAATCAATCT TCACAACAAG GTGTAGGTAG CAGAATTGGT TTTGTCAGCT TAGGGTGCCC TAAGAATTTG GTTGATTCTG AACGTATTCT TACTCAACTT CGCACCGAAG GTTATGACGT AGTGCCTACC TACAACGATG CTGATCTCGT TATCGTCAAC ACTTGTGGGT TCATTGACGC CGCAGTTGAA GAATCGTTAG ATACCATTGG TGAAGCATTA AAAGAAAATG GCAAAGTTAT TGTAACGGGT TGCTTAGGGG TAAAAGAAGA CGAAATTCGA GAGCTACACC CAAATGTCTT GGCTATTACC GGCCCTCATG CATACGAGAC GGTAGTAGAG CAAGTACACG AGCATTTACC GAAGCCTCAG CATAATCCGT TTGCGGATCT TATTCCTGAT CACGGTGTGA AACTAACGCC CCGCCATTAC GCATATTTAA AAATTTCAGA AGGCTGCAAC CACCGCTGCA CATTCTGCAT TATCCCCTCA ATGCGCGGAG ATTTAGTAAG CCGCCCTGTT GGCAACGTGC TTGATGAAGC CAAACGATTA AAAGAGGCGG GCGTGAAAGA GCTATTGGTT ATCTCTCAAG ATACCAGTGC GTACGGTGTA GATGTAAAAC ACAGAACAGG GTTCTGGAAC GGCATGCCGG TGAAGACCCA CATGCAACAG CTTTGCGAGC AACTGGGTGA AATGGGAATT TGGGTACGCC TCCACTACGT TTACCCTTAC CCCCATGTTG ATGACCTCAT TCCACTGATG AATGATGGTA AAATTCTGCC TTATCTTGAT ATTCCATTCC AGCACGCCAA TAAGCGCATT CTTAGACTTA TGAAGCGCCC AGGTAGTGCA GAAAGAGTAC TAGAGCGCGT TAAAAAATGG CGTGAACAAT GCCCGTCATT GGTAATTCGC TCTACGTTTA TCGTTGGATT TCCAGGAGAA ACAGAAGAAG AGTTTGAAGA ACTTTTAGAC TTTCTACGGG AAGCCCAGCT TGATCGCGTT GGTGCATTCG CTTATTCACC GGTTGAAGGG GCAAGAGCAA ATGACCTACC CGACCCAGTA CCAGAAGATA TAAAACAAGA ACGCCTTGCG CGCTTCATGG AAGTACAGGG TGAAATAAGC GCTGCGCGAT TAAAAGCCAG AATTGGTAAT GAGTATCAAG TGGTTATTGA TAGCGTTGAC GCCGAAGGTG CGGTAGGTCG AACGTATGCC GATGCACCTG AAGTGGACGG CCTCGTTCAT TTAAACGGGG TTTACGATGT AAAACCAGGC GATCGTGTAT GGGCTGAAGT CATTCACGCT AACGAACACG ATGTATGGGC TGTACTATCT GAAGACCAAG ACGATGAAGA AGCGCATGCA ACGGAGGGCG CAGAGTAG
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Protein sequence | MTVETFDPNK VANKTTTLET PVKVLSDNQS SQQGVGSRIG FVSLGCPKNL VDSERILTQL RTEGYDVVPT YNDADLVIVN TCGFIDAAVE ESLDTIGEAL KENGKVIVTG CLGVKEDEIR ELHPNVLAIT GPHAYETVVE QVHEHLPKPQ HNPFADLIPD HGVKLTPRHY AYLKISEGCN HRCTFCIIPS MRGDLVSRPV GNVLDEAKRL KEAGVKELLV ISQDTSAYGV DVKHRTGFWN GMPVKTHMQQ LCEQLGEMGI WVRLHYVYPY PHVDDLIPLM NDGKILPYLD IPFQHANKRI LRLMKRPGSA ERVLERVKKW REQCPSLVIR STFIVGFPGE TEEEFEELLD FLREAQLDRV GAFAYSPVEG ARANDLPDPV PEDIKQERLA RFMEVQGEIS AARLKARIGN EYQVVIDSVD AEGAVGRTYA DAPEVDGLVH LNGVYDVKPG DRVWAEVIHA NEHDVWAVLS EDQDDEEAHA TEGAE
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