Gene MADE_01803 details

Gene Information

• Locus tag: MADE_01803
• ID: 6775501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 1937920
• End bp: 1938447
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 642755239
• Product: transcriptional regulator, LysR family protein
• Protein accession: YP_002126101
• Protein GI: 196156612

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.290119
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAGG AAGCGGTAAA AGAGTCGCAG ATGTATGGGT TTAAAGTGTG TAACATTCCC 
CATGTTATTT GTGCGTCACC GCATTATTTA AGCGAAAACA AAGCGCCTGA GGAATTAAGT 
GACCTTGCCC ATCATAATAC GCTGCTTTAT AAGTTATATG ACCAAACGCA CAATGCATGG 
GAGCTGACTA AAAACGGCGA AAAATTTCGA GTAAAAGTGC AAAGTAATCG CGCAGTAAAC 
GATGGGGATA TTGTTAGAAG GTGGTGTGTT GACGGGGCAG GTATTGCAAA AAAATCTGCT 
ATTGATGTGG CCGAAGATTT GTTAAACGGA AAACTTAAGC GCGTGTTAAC GCAGTATACG 
GTTCCGCTAA CAGAAATGTG GCTAATGCTT CCCAGCCGCC ATTTAATTAC TCCAGCCGTC 
AGATTAGTTA GAGATGAATT GAAATTAGTT ATAGAAGCGC GTCGGCAAAA ACTAATTGAG 
AAAGGCTTAC TTACTGAAAA TGAATGGCCG AGTTTGAATA GCCTTTGA 

 

Protein sequence

MTKEAVKESQ MYGFKVCNIP HVICASPHYL SENKAPEELS DLAHHNTLLY KLYDQTHNAW 
ELTKNGEKFR VKVQSNRAVN DGDIVRRWCV DGAGIAKKSA IDVAEDLLNG KLKRVLTQYT 
VPLTEMWLML PSRHLITPAV RLVRDELKLV IEARRQKLIE KGLLTENEWP SLNSL