Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01784 |
Symbol | |
ID | 6775350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1921412 |
End bp | 1921960 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642755220 |
Product | hypothetical protein |
Protein accession | YP_002126082 |
Protein GI | 196156593 |
COG category | [S] Function unknown |
COG ID | [COG2947] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.280348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGCTTC TTGAAGTGAA CCCGTTGCTT AGGCTTTCAC GAGCAAAAAC CTTTTTAAAT AAAACTAAGA GACATTTTTA TAACATGGCA TATTGGCTAT TTAAAACCGA ACCCGATGCA TTCTCTATTG ATGATTTGGC AAACCGTCCT GAGCAAACTG AACCATGGGA TGGCGTAAGA AACTACCAAG CCCGTAACTT TTTACGTGAT GGCGTAAAGC TAGGCGATAA GGTGTTTATT TATCACTCCA GCTGCAAACT AGTTGGTATT GCAGGCGTTG CAGAAGTGGT GAAAGACGGG TACCCAGACA CCACACAGTT TAACCCTGAG TCAAAATACT ACGATCCTAA ATCCAGCGAA GAAAACCCGC GTTGGTTTCG TGTGGATGTG AAGTTTGTAG AAAAGTTTTC CAGCGTACTG CCACTTTCTG TGATTAAAAG TATGGAAGGT ATTACTGAGC TACCTTTAGT TAAAAAAGGC GGAAGGTTAT CAATAATGCC GGTACAAGAG GGCGAGTGGC AGCAGCTGTA CGCTGCTGCG AAAGGCTAA
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Protein sequence | MPLLEVNPLL RLSRAKTFLN KTKRHFYNMA YWLFKTEPDA FSIDDLANRP EQTEPWDGVR NYQARNFLRD GVKLGDKVFI YHSSCKLVGI AGVAEVVKDG YPDTTQFNPE SKYYDPKSSE ENPRWFRVDV KFVEKFSSVL PLSVIKSMEG ITELPLVKKG GRLSIMPVQE GEWQQLYAAA KG
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