Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01780 |
Symbol | |
ID | 6776285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1915197 |
End bp | 1916351 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755216 |
Product | hypothetical protein |
Protein accession | YP_002126078 |
Protein GI | 196156589 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.748339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAG TTTGCTTGCT ATTGTGGGGA AAACCTAAGC GCAAGCTAAA TAGAAAGCGT ATTAATATGG GGAGAGTGCT AATGAAAGTG GCTTGGTTGA TCGGTGTGTT AATTGCCCTT TACCTACTGT TATGGCCTGT ACCCATAGCG CCAGTTTCAT GGCAATCACC TGCCAATAAT GGGTTTGAAG GTGAATTCGC CGAAAACACG CGGCTTTCCG ATTTAACCCT TATTGATCTG GGCGACGACT ATGGGCCAGA GGACTTTGCG TTAAACCATG AAGGAACCTT GGCGACATCG AGCCATTCAG GTGCCATTCT GTTAAAGAAA AAAGGCGAGC GTACCTTTTC TCCCTGGGTA AATACGGGCG GTCGCCCCCT AGGCATTGAG TACGATAGTA AAGGAAACCT TCTAATCGCC GATGCTCACC TTGGGTTACT TAAGATAGAT ACTGCTGGCG TACTCTCTGT GCTGGTTGAT AGCGTAAACA GCACCCCTGT CGTTTATGCA GATGATGTGG ATATCGCAGA AAATGGCAAG GTGTACTTTA CCGACGCGAC CACCAAGTTT TCAGCCAAAG CGTTTGGTGG CACCCTAAAT GCAAGTTTGC TTGAAATTTT AGAGCACAGA GGGAATGGTA GGCTAATCGA ATACACCCCT TCAACGGGTA AAAGCAAGGT CATTATGGAT GGTTTAGTCT TTGCTAATGG AGTAGCGGTT AGCCATGACC AAGCGTCAGT TTTAGTTAAT GAAACGGGAA ACTACCGGGT GCTACGCTAT TGGCTAGGTG GGCCAAGGTC CGGTCAGGTT GATATCGTCA TTGATAACTT GCCCGGCTTT CCCGATAACA TAAGTGCGGC AAGAAACGGT GGCTATTACG TGGGGCTGGC ATCACCGCGT TCAAGCGCCG TTGATAAACT CGCCGATAGT CCTTTTTTAC GGAAAATAGT GCAACGACTT CCTAAGCTTC TTCGCCCACA GGGGCAAGCA TACGGCCATC TAATAAAAAT AAGTGAACGC GGAGAAATAG AGCTAAGCTT GCAAGACCCA ACAGGCGCAT TTCCTTTCAC AACGGGCGCA ATTGAAACCG ATGAAGAGCT GTACATTAGT AGCTTAACAG CCACTGCTGT GGGCGTGTTA GGTCTAAAAG AGTAG
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Protein sequence | MLKVCLLLWG KPKRKLNRKR INMGRVLMKV AWLIGVLIAL YLLLWPVPIA PVSWQSPANN GFEGEFAENT RLSDLTLIDL GDDYGPEDFA LNHEGTLATS SHSGAILLKK KGERTFSPWV NTGGRPLGIE YDSKGNLLIA DAHLGLLKID TAGVLSVLVD SVNSTPVVYA DDVDIAENGK VYFTDATTKF SAKAFGGTLN ASLLEILEHR GNGRLIEYTP STGKSKVIMD GLVFANGVAV SHDQASVLVN ETGNYRVLRY WLGGPRSGQV DIVIDNLPGF PDNISAARNG GYYVGLASPR SSAVDKLADS PFLRKIVQRL PKLLRPQGQA YGHLIKISER GEIELSLQDP TGAFPFTTGA IETDEELYIS SLTATAVGVL GLKE
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