Gene MADE_01780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01780 
Symbol 
ID6776285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1915197 
End bp1916351 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID642755216 
Producthypothetical protein 
Protein accessionYP_002126078 
Protein GI196156589 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.748339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAG TTTGCTTGCT ATTGTGGGGA AAACCTAAGC GCAAGCTAAA TAGAAAGCGT 
ATTAATATGG GGAGAGTGCT AATGAAAGTG GCTTGGTTGA TCGGTGTGTT AATTGCCCTT
TACCTACTGT TATGGCCTGT ACCCATAGCG CCAGTTTCAT GGCAATCACC TGCCAATAAT
GGGTTTGAAG GTGAATTCGC CGAAAACACG CGGCTTTCCG ATTTAACCCT TATTGATCTG
GGCGACGACT ATGGGCCAGA GGACTTTGCG TTAAACCATG AAGGAACCTT GGCGACATCG
AGCCATTCAG GTGCCATTCT GTTAAAGAAA AAAGGCGAGC GTACCTTTTC TCCCTGGGTA
AATACGGGCG GTCGCCCCCT AGGCATTGAG TACGATAGTA AAGGAAACCT TCTAATCGCC
GATGCTCACC TTGGGTTACT TAAGATAGAT ACTGCTGGCG TACTCTCTGT GCTGGTTGAT
AGCGTAAACA GCACCCCTGT CGTTTATGCA GATGATGTGG ATATCGCAGA AAATGGCAAG
GTGTACTTTA CCGACGCGAC CACCAAGTTT TCAGCCAAAG CGTTTGGTGG CACCCTAAAT
GCAAGTTTGC TTGAAATTTT AGAGCACAGA GGGAATGGTA GGCTAATCGA ATACACCCCT
TCAACGGGTA AAAGCAAGGT CATTATGGAT GGTTTAGTCT TTGCTAATGG AGTAGCGGTT
AGCCATGACC AAGCGTCAGT TTTAGTTAAT GAAACGGGAA ACTACCGGGT GCTACGCTAT
TGGCTAGGTG GGCCAAGGTC CGGTCAGGTT GATATCGTCA TTGATAACTT GCCCGGCTTT
CCCGATAACA TAAGTGCGGC AAGAAACGGT GGCTATTACG TGGGGCTGGC ATCACCGCGT
TCAAGCGCCG TTGATAAACT CGCCGATAGT CCTTTTTTAC GGAAAATAGT GCAACGACTT
CCTAAGCTTC TTCGCCCACA GGGGCAAGCA TACGGCCATC TAATAAAAAT AAGTGAACGC
GGAGAAATAG AGCTAAGCTT GCAAGACCCA ACAGGCGCAT TTCCTTTCAC AACGGGCGCA
ATTGAAACCG ATGAAGAGCT GTACATTAGT AGCTTAACAG CCACTGCTGT GGGCGTGTTA
GGTCTAAAAG AGTAG
 
Protein sequence
MLKVCLLLWG KPKRKLNRKR INMGRVLMKV AWLIGVLIAL YLLLWPVPIA PVSWQSPANN 
GFEGEFAENT RLSDLTLIDL GDDYGPEDFA LNHEGTLATS SHSGAILLKK KGERTFSPWV
NTGGRPLGIE YDSKGNLLIA DAHLGLLKID TAGVLSVLVD SVNSTPVVYA DDVDIAENGK
VYFTDATTKF SAKAFGGTLN ASLLEILEHR GNGRLIEYTP STGKSKVIMD GLVFANGVAV
SHDQASVLVN ETGNYRVLRY WLGGPRSGQV DIVIDNLPGF PDNISAARNG GYYVGLASPR
SSAVDKLADS PFLRKIVQRL PKLLRPQGQA YGHLIKISER GEIELSLQDP TGAFPFTTGA
IETDEELYIS SLTATAVGVL GLKE