| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01770 |
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| Symbol | |
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| ID | 6776051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1904900 |
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| End bp | 1907491 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755206 |
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| Product | predicted extracellular nuclease |
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| Protein accession | YP_002126068 |
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| Protein GI | 196156579 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.609758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT CATTAACTTT ACTATCTGCA GGGATAATTT CTGCGCTTTC TTCCACAGCA
GTTAATGCTA ACGATTTGGT CATTAGTGGT GTCATTGATG GGCCGCTAAG TGGCGGTGTA
CCCAAAGCCG TTGAACTTTT TGTGGTCAAC GACATTGCCG ACTTGTCCGC TTATGGTGTT
GGCTCTGCCA ATAATGGTGG TGGCACAGAT GGCGAAGAGT TCACCTTCCC AACTGGCGTA
TCTGCAAGTG CGGGAACCTA TATTTACGTT GCATCTGAAA TAGACGGCTT TACCGCGTTT
TTCGGTTCAG CACCTGACTA TGATAGCTCG TCAATGGGCA TTAATGGCGA CGATGCTATT
GAACTTTTCA AAGACGGTAG TGTTATTGAT ACGTTTGGCG ACATTAATAC CGATGGAAAC
GGCACCGCGT GGGAATACCT TGATGGGTGG GCTTACCGTA CCTCAGGCCA AAACGCTAAC
GGCGGCAACT TCGATTCAGC TAACTGGACA TTCAGCGGTG TGGATGCGTT AGATGGCGCA
ACAACAAATA CCGATGCAAC GACACCTTTC CCAACAGGTA CTTTCACAAC TGAAGGTGGA
GATGAAGTAG TCGATGAACC TGAAGTACCG GCCGTTGAGC TAGGGGTTTG TGGCGATGAC
GCGGTGCTTA TCAGTACTAT TCAAGGTAGT GAGAATAGCT CTGCAGAGGT GGGCAATAAG
GTTATTGTAG AAGCTATCGT AACAGGTACG CGAGATGGCG GATTCTTTAT CCAAGAAGAA
ACGGCAGATT ACGACGCTAA TGAAGCAACG TCTGAAGGCC TGTTGGTAGA AGGTAATATA
GACATTGAAG TAGGCAACCT GGTTCGTCTT TACGGAGAAG TTGAAGAAAA TTACGGCATG
ACCACGCTGG TTATGGACAG CGCTGTGGTA GCGTTAGATT GTGGCGAAGC GGAATCGGTT
GCGAGCGTAG CCCTTTCAAT GCCTTATGAA GTTGACTTAG AAACACTGGA AGGCATGGTA
GTAAGCGTTA CCGATGCTAC CGTAATAAGC ACGAATAACT TGTGGCGCTT CGGTGAGATT
GTCGTTAGTG ACACGATTAA GCGTCAGCCG AGCGACGTTG CAGCTCCACT GTCAGAAGAC
TACGTTGCAG CAGAGCAAGC AAGCGAAACC AGCTTACTCA CTATTGAAGA CAATAGTGGC
TCACAATATC CTGATACACT TAATTACTTC CCTACTTTCA GCTATGCGAA CGCCATTCGC
ATTGGCGACA GTGTGTCGGC CTCGGGCCCG CTAAACTATA GCTTTGGTAC TTACAGAATA
AATCCAAGTG ACATCATTGA AGTAGCTTCA ACACGCGAAG CCAACCCTGT TGTTGCTGAA
GGTAACCTTT CAATCGCGAC GTTTAACGTA CTGAACTATT TCAATGGCGA AGTAGATGAA
AACGGCGATG TGACCTTTGA TTATGACAAC AATCGCGGTG CGTCAGACGA CGTGGCCTTC
GCCCTACAAC AAGGCCGTAT TGTCGAAGCC ATTATTAATT TGAATGCTGA TGTTGTTGGC
TTAATGGAGA TAGAGAATGA TGGCTTTGGC GACGATAGCG CTATCCAGTC TCTTGTTAAT
GCCATTAATG CTGAATTAGG TGAAACCGAA CAATACGCAT TTGTTGCTAC CAGCGACGGT
AGCGAAATAG GTACCGATGC CATTACCGTA GGCTTACTAT ATAAGGCGTC TGTAGTGACA
CCTGAAAGCG ATGCAATGAT TGTGGATATG CCAGTACAAC AAATTGATGA AGATAGTCTG
GCACGTATGC GCCCTAGCCT TCTTCAGTCG TTCGTTCATA ACGAAAGTAG CAAGTCGTTC
CTTGTTGCGG TAAATCACTT TAAATCTAAA GGTTCGCAGT GTGCTGAGGA CGTAGCAGAA
GCACCGTCTG AAATTACGAC AATTCAAGGC AGCTGTAATG CACTTCGCGT ATCGGCAGCG
ATCACGCTTG GTAACGCATT GAGCGATGAG AGCCTGCCTG AGCGTAAGGT CATCTTGGGC
GACTTAAATG CATACAGTGC TGAAGACCCT GTCGCTGTAC TTACCGATTA CACACCTGAA
TCACGTGGAT ACACCATCGC TACTGCTATA AACACGGGCA TGGACGAAGG TGCTTCGGTT
GACGTTGAAT CTAGCTTTGG CTATCACAAT TTAGCCGAAG AGTTCGACGC AGAAGGCTTT
TCATATTGGT TCTACGGCAC TGAACAAGTG GGTAGTTTAG ATCACGTGTT AGCAAGTGAC
GCCATGCTTG CAGACGCTAT TGATGGTGCG CACTGGAATA TTAACTCAGT GGAAGCGTAT
CAGCTACAGT ACGATCAAGC GCTTCGTTTC TATCCTGAAG AAGAAGGCTA CGCATTTACC
GACGTTGGCC CGTTTAGAAG CTCGGACCAT GACCCATTCA TCGCCACATT CGATTTACAA
GCGGACGTAG TTGAAGACGA TGAAGATGAC AACAAGGATA GCTCAGGAGG AGCGATGGGA
GGAATTTTCG CATTGCTAGC CGCAATGGTA GGTTTTCGCC GTCGTCAGCA TAATGTTGAA
AAGAAAAGCT AA
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| Protein sequence | MKTSLTLLSA GIISALSSTA VNANDLVISG VIDGPLSGGV PKAVELFVVN DIADLSAYGV
GSANNGGGTD GEEFTFPTGV SASAGTYIYV ASEIDGFTAF FGSAPDYDSS SMGINGDDAI
ELFKDGSVID TFGDINTDGN GTAWEYLDGW AYRTSGQNAN GGNFDSANWT FSGVDALDGA
TTNTDATTPF PTGTFTTEGG DEVVDEPEVP AVELGVCGDD AVLISTIQGS ENSSAEVGNK
VIVEAIVTGT RDGGFFIQEE TADYDANEAT SEGLLVEGNI DIEVGNLVRL YGEVEENYGM
TTLVMDSAVV ALDCGEAESV ASVALSMPYE VDLETLEGMV VSVTDATVIS TNNLWRFGEI
VVSDTIKRQP SDVAAPLSED YVAAEQASET SLLTIEDNSG SQYPDTLNYF PTFSYANAIR
IGDSVSASGP LNYSFGTYRI NPSDIIEVAS TREANPVVAE GNLSIATFNV LNYFNGEVDE
NGDVTFDYDN NRGASDDVAF ALQQGRIVEA IINLNADVVG LMEIENDGFG DDSAIQSLVN
AINAELGETE QYAFVATSDG SEIGTDAITV GLLYKASVVT PESDAMIVDM PVQQIDEDSL
ARMRPSLLQS FVHNESSKSF LVAVNHFKSK GSQCAEDVAE APSEITTIQG SCNALRVSAA
ITLGNALSDE SLPERKVILG DLNAYSAEDP VAVLTDYTPE SRGYTIATAI NTGMDEGASV
DVESSFGYHN LAEEFDAEGF SYWFYGTEQV GSLDHVLASD AMLADAIDGA HWNINSVEAY
QLQYDQALRF YPEEEGYAFT DVGPFRSSDH DPFIATFDLQ ADVVEDDEDD NKDSSGGAMG
GIFALLAAMV GFRRRQHNVE KKS
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