| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01690 |
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| Symbol | |
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| ID | 6775460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1812419 |
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| End bp | 1813855 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755123 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_002125988 |
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| Protein GI | 196156499 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00271283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGA ATTTATCAGA ACGCTTAGGC CAAACATTAC GAAATGTAAG TGGTAAAGGG
CGTCTTACTG AAGACAATAT TAAAGAGACG CTACGTGAAG TGCGCATGGC GCTGCTTGAA
GCCGACGTAG CGCTGCCAGT GGTCAAAGCG TTTGTTGCTC AGGTAAAAGA GCGTGCGGTT
GGTACAGAAG TTACTAAAAG CTTAAAGCCA GGCCAAGTAT TCATAAAAAT CGTTCAGTCT
GAACTCGAGT CGGTAATGGG GGAGGCGAAT GAAAAGCTTA ACCTAGCCAC TCAGCCTCCT
GCTGTAGTGC TTATGGCTGG TTTACAAGGT GCGGGTAAAA CCACCTCTGT AGGTAAACTT
GCTAAGTACC TGACTGAACG TGAGAAAAAG AAAGTGATGG TAGTCAGTGC TGACGTTTAT
CGTCCAGCCG CTATCAAGCA GCTTGAAACC CTAGCTGATG AAGTGAAGGT TGCGTTTCAC
CCATCTACTA TCTTACAAAA GCCCATTGAT ATCGTTAACG ATGCCATCGC TGAAGCGAAG
AAAAACTTCT TTGATGTTCT GCTTGTAGAT ACAGCAGGCC GTTTGCACGT CGATAACGAC
ATGATGAACG AAATTACAGA GTTACACGCT GCGGTTAAGC CCATTGAGAC CCTATTCGTA
GTTGATGCCA TGACAGGTCA AGATGCCGCT AATACAGCAA AAGCGTTTAA CGACGCGCTA
CCACTGACCG GTGTTATTCT TACTAAGGCC GACGGTGACG CCCGCGGCGG TGCGGCATTA
TCTGTACGTC ACATAACAGG TAAGCCCATT AAGTTCATCG GTATGGGCGA AAAAGTGGAT
GCGCTTGAGC CATTCCACCC TGAGCGTATT GCTTCTCGTA TCTTGGGTAT GGGCGACGTA
CTAAGCCTTA TCGAAGAAGT TGAGCGCAAG GTCGACAAAT CAAAAGCCGA AAAGCTGGCG
AAAAAAGTTC AAAAAGGCAA GGGCTTTGAT CTTCAAGACT TTAAAGATCA GCTTGAGCAA
ATGAAGAACA TGGGCGGCAT GATGGGCATG CTAGATAAGC TGCCTGGCAT GGGTGGTATG
TCTGATAAGA TTAAAGATCA GGCAAACGAC AAGCAGTTCA ACCAAATGGA AGCCATTATT
AATTCAATGA CACCAGCTGA GCGCGCTCGC CCTGATATTA TCAAAGGCTC GCGCAAGCGT
CGTATCGCAG CGGGTTCAGG TACGCAAATA CAAGATGTAA ACCGCTTGCT TAAGCAGTTT
ACACAAATGC AGAAAATGAT GAAAAAAATG TCTGGCGGCG GCATGAAGAA AATGATGCGC
CAGATGAAAG GCATGGTGCC ACCCGGTGGC GGTTTAGGTG GACCAGGCGG GCCAGGCGGC
CCTGGTGGTT TTGGCGGAGG CGGCTTCGGC GGAGGCGGTG GTTTCCCTCC TCGCTAA
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| Protein sequence | MFENLSERLG QTLRNVSGKG RLTEDNIKET LREVRMALLE ADVALPVVKA FVAQVKERAV
GTEVTKSLKP GQVFIKIVQS ELESVMGEAN EKLNLATQPP AVVLMAGLQG AGKTTSVGKL
AKYLTEREKK KVMVVSADVY RPAAIKQLET LADEVKVAFH PSTILQKPID IVNDAIAEAK
KNFFDVLLVD TAGRLHVDND MMNEITELHA AVKPIETLFV VDAMTGQDAA NTAKAFNDAL
PLTGVILTKA DGDARGGAAL SVRHITGKPI KFIGMGEKVD ALEPFHPERI ASRILGMGDV
LSLIEEVERK VDKSKAEKLA KKVQKGKGFD LQDFKDQLEQ MKNMGGMMGM LDKLPGMGGM
SDKIKDQAND KQFNQMEAII NSMTPAERAR PDIIKGSRKR RIAAGSGTQI QDVNRLLKQF
TQMQKMMKKM SGGGMKKMMR QMKGMVPPGG GLGGPGGPGG PGGFGGGGFG GGGGFPPR
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