| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01664 |
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| Symbol | |
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| ID | 6778876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1783228 |
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| End bp | 1783617 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755096 |
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| Product | ribosomal RNA large subunit methyltransferase J (rRNA (uridine-2-O-)-methyltransferase) |
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| Protein accession | YP_002125962 |
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| Protein GI | 196156473 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000612098 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAA AGAAACACTC CGCCAGCAGT AAGCGCTGGC TTCAAGAACA CGTTAACGAC
CATTATGTGC AAAAAGCAAA TAAGGAAGGT TGGCGATCGC GAGCTATCTA CAAACTGGAA
GAAATCCAGA AAAAAGATAA GCTTATAAAG CCCGGAATGA CACTTGTAGA CCTTGGGGCT
GCGCCTGGGG GCTGGTCACA GCTAGCCGCA CAGCTCGTTG GTGAAAATGG TCAAGTTATC
GCGTGCGATA TTTTGCCTAT GGATCCCATT GTAGGCGTCG ACTTTTTACA AGGTGATTTT
CGAGAAGATG CAGTTCTCGA CGCACTATTG AACAGAATTG GCGGGAACAC CGTAGATATA
GTGTTGTCTG ATATGGACCG ACTGCAGTAA
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| Protein sequence | MTKKKHSASS KRWLQEHVND HYVQKANKEG WRSRAIYKLE EIQKKDKLIK PGMTLVDLGA
APGGWSQLAA QLVGENGQVI ACDILPMDPI VGVDFLQGDF REDAVLDALL NRIGGNTVDI
VLSDMDRLQ
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