Gene MADE_01661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01661 
Symbol 
ID6779114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1780470 
End bp1781432 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content45% 
IMG OID642755093 
Productputative DNA polymerase III, delta subunit, probably ATP hydrolase 
Protein accessionYP_002125959 
Protein GI196156470 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000516884 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGTG ACGAACCTCA ACAAAAGTTT GATGTCATTG AGCAAATACG TGCTAAAGCA 
AAGGCCAATG GTTTTGAAGA ACGCACGGTC TTGGTGGCTG AAACAGGTTT TAATTGGAAC
CAGTTGATTG AAGCCACGCA AAGCATGTCG CTGTTTTCTA GCCAGCAGTT TATTGAACTT
GAGTTACCTA CCGGTAAGCC GGGTACTGAG GGCAGTAAAA TGCTGCAAGA AGTCGCAGCG
TCGCTAAGCC CCGATATCTT GTTATTGGTT CACGGCCCCA AAATCGGCAA AGATGTACAG
CGCGGAAAGT GGTTTAAAGT TTTAGATGAC ATTGGCGCCT CTGTGCTTTG CTATCCATTA
GAAGGGAAAC AGCTTAGCGC TTGGTTAAAT CAACAACTCA AAGCCCACCA ATTATCTGTG
TCCGCTGCTG GGGTTAAAAT GATTGCCGAT TTTTGTGAAG GCAACATGCT GGCCGCTAAA
CAGGAAATTG ATAAACTAGC CCTACTCTAC CCCCAGCAAT CTATTTCAGA AGCGCAAATA
GAGCAGGCTA TGGTAGACCA GTCACGTTTT AACGTGTTTC AGCTGGTCGA TGTCATGCTA
AGCGGGGATA GCATCCGCTG TATTAAGATG CTTTACCGGC TGGAAAGTGA AGGCTTAGAG
CCGAATATTA TTATTTGGGC ATTAATTCGA GAATGGGAGC AACTTTGGAA GTTAAAGCTT
GCTGAGCAAA GCGGTCCCAT TCAGTGGCAA AAGTTTGGAA TTTGGCGTAA CCGTCAGGGT
TACTACCAGA GTGCGTTAAG TCGCCTTAGC TTCGCTCAAT TAGAAGATAT TCAACACGCC
CTTACCCAAT CAGATCATGC CTTTAAGCAA AACGTAATCG CTCGCCCTTA TGTTGAAATG
TGTCACCTTT GTATGATGTT CATGGGGTTC GATTTACGCG AAACACCGCT ATTACAAGCA
TAA
 
Protein sequence
MFGDEPQQKF DVIEQIRAKA KANGFEERTV LVAETGFNWN QLIEATQSMS LFSSQQFIEL 
ELPTGKPGTE GSKMLQEVAA SLSPDILLLV HGPKIGKDVQ RGKWFKVLDD IGASVLCYPL
EGKQLSAWLN QQLKAHQLSV SAAGVKMIAD FCEGNMLAAK QEIDKLALLY PQQSISEAQI
EQAMVDQSRF NVFQLVDVML SGDSIRCIKM LYRLESEGLE PNIIIWALIR EWEQLWKLKL
AEQSGPIQWQ KFGIWRNRQG YYQSALSRLS FAQLEDIQHA LTQSDHAFKQ NVIARPYVEM
CHLCMMFMGF DLRETPLLQA