| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01583 |
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| Symbol | |
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| ID | 6777668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1698776 |
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| End bp | 1700209 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642755015 |
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| Product | Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| Protein accession | YP_002125881 |
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| Protein GI | 196156392 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATCG ACAATGTTAA CTTGTTTAAT CTTCTGGAAA ATACGCACAT TGGCGTGGTT
ATTCACAATG AATCAGGTGC CGTGGAGTAC GCTAACCCTG CGGCGTTGGC AATTCTTAAC
CTAAACATAG AGCAACTCAA AGAAAAAAGC CTGGATGTGG ACGCTTGGGA GTTCATAGAT
ATGCAAAATC GTACAGTACC GTACAGCGAA CTCCCCATCT CCAAGGTATT AAACGCTGGT
AGTGCTATTA ATGAACAGAT ATTAGGTACA ACCCACCATG AAACGGGCCA GATTACATGG
CTTAGCGTCA ATGCCTACTC AGAGAAGTAT GAAGTCAATG GCAAGACCCC GTCATTTGTG
GTGGTTTACT TCGTTGATAT TACGAAAAAA GTGAACAACT TTTCTTATAA AGATATCGTG
CAAAACGCAC AGGATATGAT TTTAGTCACT GAAGCAAAAA ATATTGATGC TCCACTTTCT
CCCAAGATAT TTTATGCGAA TGAAGCATTG TGCAGGCATA CAGAGTATAC GCTTGAGGAA
CTAATTGGTA AAACGCCGCG AATATTTCAA GGCACACTTA CCGACAAAGA GGCGACTCAG
CGCATAAGGC AAGCGCTACT TGAGCACCGA CCATGTACTG AAACACTGCT TAACTACACA
AAAACAGGTA AGCCGTTTTG GGTTCAAATG AATATATTTC CACTCACAAA TGACTATGGC
GAAGTTACCC ATTTCGCGGC GGTACAGCGC GATGTTAGCG AGACGAAGTT TCAAACCGAG
CAATTAGATA AGCGAAACGC AGAACTTAAA AGAATTAAAG ATAATTTAGA GCAGCTCGTT
AATAACCGCA CTAGGGAGCT GCGCTCTGCT AACCTGAAGC TAGAGAAATT AGCTTATGTT
GACGCGCTAA CACACATACC GAATAGAAGA GCATTTTTAG ACAGCCTTAA AAAATTCCTA
CATCTTGCCT GCCGAAATAA ACAGGCGATT TTAGTTGGTA TTGCCGATGT CGATCATTTT
AAATCGATCA ATGATCAATT TGGCCATGCA TTCGGTGATG ATGTACTCGT TACTGTTGCA
CAAACTCTAC AAAAGCTATT TCGTCAGGAA GATTGCATAG GACGAATTGG CGGAGAGGAG
TTTGCATTCT GCATGTCGCT ACCTACACCA AGGGCTGCCA ACCAGTTGCT TGAAAGATTT
CGCGAAACGA TATGTCACCT TCATACCACC CAACCAATAT TAAAAGGCCG AAACGTAACC
GTGAGTATTG GCGCGGTGTA TACGCAAAAA ACGGAAAATA CAGAGATAAA AGCATTACTT
AAAGCCGCAG ATGATGCGCT TTATAAAGCC AAAAATAGCG GTCGAAATGC TGTTGAATGT
ACGCTAGATG TAGATGTTTT GGTGACGCCC AAATTAGTAA AAGAATGTAA TTAA
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| Protein sequence | MSIDNVNLFN LLENTHIGVV IHNESGAVEY ANPAALAILN LNIEQLKEKS LDVDAWEFID
MQNRTVPYSE LPISKVLNAG SAINEQILGT THHETGQITW LSVNAYSEKY EVNGKTPSFV
VVYFVDITKK VNNFSYKDIV QNAQDMILVT EAKNIDAPLS PKIFYANEAL CRHTEYTLEE
LIGKTPRIFQ GTLTDKEATQ RIRQALLEHR PCTETLLNYT KTGKPFWVQM NIFPLTNDYG
EVTHFAAVQR DVSETKFQTE QLDKRNAELK RIKDNLEQLV NNRTRELRSA NLKLEKLAYV
DALTHIPNRR AFLDSLKKFL HLACRNKQAI LVGIADVDHF KSINDQFGHA FGDDVLVTVA
QTLQKLFRQE DCIGRIGGEE FAFCMSLPTP RAANQLLERF RETICHLHTT QPILKGRNVT
VSIGAVYTQK TENTEIKALL KAADDALYKA KNSGRNAVEC TLDVDVLVTP KLVKECN
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