Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01574 |
Symbol | |
ID | 6776720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1686023 |
End bp | 1687084 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642755006 |
Product | predicted permease |
Protein accession | YP_002125872 |
Protein GI | 196156383 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0334902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGA TCCTCGATTT ATACATCGCT CGAACGCTAC TAAGTACGAT CACTGTCACG CTAAGCGTAC TTATTGGCTT AAGCGCGTTA ATCAAGTTCG TTGAACAGCT GCGTAAAATT GGTGAAGGCG ATTACGACAT GCTCGCCGCC TTTATCTACG TGTTATTAAG CCTTCCGCGA GACCTAGAAC AATTCTTTCC CATGGCGACG TTGCTTGGCG GCCTTATTGG CATGGGCGTC TTGGCCAGCA ATAGCGAACT GGTGGTAATG CAGGCTGCGG GCATGAGCCG CTGGAACATC ATTAACTCGG CCATGAAGTC TACCCTTGTC ATGATTTTAG CGGTCATGGC GGTGGGCGAA TGGGTCACGC CGTTCAGCGA GACCAAAGCT AAACAACTAC GCACTGAAGC GATTTCTGGG GGCAGTTTAT TTTCATCTGA CAAGCTTGTT TGGGCCAAAG ACGGCGATAG GTTTGTGAGT ATTGGTCAGG TTATCAGCCA AGACTCCCTT AAAGACGTGA GCATTTTTAA CTTTAATTCA GACCTGTCAC TACAAAGCAT TACCTATGCA AAAAACAGCA CATATGATGG CGATGGCTGG TGGTTAAGCA ACGTAGAAGT CACACAGTTT ACGGAAACGC AAGTCTCGGT TGATGACACC GACCGTATGC GCTGGAACTC AACGCTAACC CCAGATAAGT TAGGCATTGT AGCGGTTAAA CCCGAGGCCT TATCCATTAC TGGCCTGCTT GATTACGTAA ATTACTTAGA CAATAACGAC CAAGACCCGT CTCGCTATGA ATTGGCACTA TGGCGAAAAA TATTTCAGCC TATTTCAGTG GGCGTGATGT TGTTGATGGC GCTTTCGTTT ATCTTCGGGC CGTTACGCAG CGTAACTATG GGAGCGCGCG TGATCATGGG CGTACTCACA GGCTTTGGTT TCTTTATTCT AAACGAGGTT TTCGGCCCAG TAAGTTTGGT TTACCAATTG CCGCCCTTCC TTGGCGCATT GCTACCAAGC CTGCTGTTTG CTGCTGTCGC CGGTGTGATG CTTAGACGTT GA
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Protein sequence | MFKILDLYIA RTLLSTITVT LSVLIGLSAL IKFVEQLRKI GEGDYDMLAA FIYVLLSLPR DLEQFFPMAT LLGGLIGMGV LASNSELVVM QAAGMSRWNI INSAMKSTLV MILAVMAVGE WVTPFSETKA KQLRTEAISG GSLFSSDKLV WAKDGDRFVS IGQVISQDSL KDVSIFNFNS DLSLQSITYA KNSTYDGDGW WLSNVEVTQF TETQVSVDDT DRMRWNSTLT PDKLGIVAVK PEALSITGLL DYVNYLDNND QDPSRYELAL WRKIFQPISV GVMLLMALSF IFGPLRSVTM GARVIMGVLT GFGFFILNEV FGPVSLVYQL PPFLGALLPS LLFAAVAGVM LRR
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