| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01475 |
|---|
| Symbol | |
|---|
| ID | 6775506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1584877 |
|---|
| End bp | 1585581 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642754911 |
|---|
| Product | chain II protein of putative cytochrome c oxidase |
|---|
| Protein accession | YP_002125778 |
|---|
| Protein GI | 196156289 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGG TAAATAGAGT AACAGAATAT CTTTTCACTG CCAGTGCCTT ATTGTTGGCA
GGTTGCAGTG AGCCGTATTC CATTCTCGCC CCTGCAGGTC CGTCAGCCAA GGCGGTTACC
ACAATCTGGT GGGGCATGCT CACGGTTGGA GTCGTGGTAT TACTGGGGAT TTGCTCACTC
TGGTGGTATG CCAGCTTCCG ACGCAATCGT AAATATAGCG ATGCAGATGT AAAACGCGTT
CTTACTCGTA TGGTTTTGTG GGGCGGTATT GTGTTACCCA CGGTGGGCAT AACCGTATTG
CTCATTTTTG GTATTCCAGC CGGGAATATT ATGCTGCCTT GGGCAGATGA GCGCGCTGTG
CGAATTGATG TGCATGCCAG ACAATGGGCG TGGGATGTAA CCTATCCGCA ACATGATATT
GAACTAACAG ATGAAATTCA TATTCCTGTC GATACGCCAA TTGATATTCA TGTGACTAGT
GCGGACGTGA TTCATGGCTT CTGGGTGCCA CGGCTAGGGG GAAAGATTGA TGCGATCCCG
GGGCACACGA ACATCGTGCG TTTGCAAGCC GATGAAGTAG GTGAGTTCGG TGGCCAATGC
GCCGAATATT GCGGCCTTTC TCACGCTAAA ATGCATTTTA AAGTCATTGC TCATTCTGCT
GAGAAGTTTG ATGCATGGCT CGTCCAACAA GGTAAAACAC AATGA
|
|---|
| Protein sequence | MSLVNRVTEY LFTASALLLA GCSEPYSILA PAGPSAKAVT TIWWGMLTVG VVVLLGICSL
WWYASFRRNR KYSDADVKRV LTRMVLWGGI VLPTVGITVL LIFGIPAGNI MLPWADERAV
RIDVHARQWA WDVTYPQHDI ELTDEIHIPV DTPIDIHVTS ADVIHGFWVP RLGGKIDAIP
GHTNIVRLQA DEVGEFGGQC AEYCGLSHAK MHFKVIAHSA EKFDAWLVQQ GKTQ
|
|---|
| |