Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01452 |
Symbol | |
ID | 6776046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1557139 |
End bp | 1559511 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642754890 |
Product | DNA polymerase II |
Protein accession | YP_002125757 |
Protein GI | 196156268 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCTT CATCAATTCA GCAAGGATTT ATACTCAATA AAGGTACCTT CACACTACGT GGCAAAGTCT ACGTAGAACT GTGGGTTAAA ACGCCGACAG GTACCGTTAG GTTAATATCT GCGCCCCAAG CCCCCACGTG TTTTGTGGCA TTGGAGCATG TTGAAGCGTT ACAGAGCATC GCACAACGGG TTCCGGCCAC ATTAGACATT AAGAATGACG GCTTTAATAC GCTAGAACAA AAGCAAGTGG CCACGGTTAA AACCGCGACT GAGTCTCACA TGCACCAGCT ACGTCAGCTT GCACGAGAGG CAAATATTGT ACTGTACGAA GCCGACATCC GTGTGGCTGA TCGCTATTTA ATGGAAAGGT TTGTGTATGG CGCGGTTGAA TTTATCGGGC CTAACGCCGG CGCTGATAGC TCACCGACAA CAGTAATTGA AAATGCACAA ATACGCCCCT GTCACTTTCG AACACGCTTC TCTTCTCTAA GCATAGATAT TGAGTGTGAC GAACATGAAA TGCTGTTTAG TATTGCTTTA GCCGGTGAAG GGGTAAACCT TGTGCTCCTT GTTTGCCCAC CAACTTTTGA AAAGCGGGGT GTGGAGCAGC GAAACGACAA GCCATACCAA CTACTAGTGC TTAATTCGGA AAAAGAGCTA CTACACGCGT TTTTTCACCA TGTTACCTCC TACGACCCCG ACATTATTTT AGGATGGAAT GTTAAGCAGT TCGACATGGC AGTACTTGCT CGAAGGGCCA AAGCGAATAG ACTCAAATTT ACCCTTGGCC GCCATGAACG CGAAGCTTCA GTCAGACAAT GGGAAGATCA AACCTTGGTT GATGTACCAG GGCGCTGTGT AATAGATGGC ATTGAAGCAC TTAAAACAAT GACCTATCAG TTTGAGTCGT TCTCGTTAGA TAACGTTTCA GAGGCACTGT TAGGTGAAAA CAAACTTATT CAAGAGACCG ACAAATTAGC GGCGATAAAA CGTTTATATC ATGAAGACCC CATTGCGCTG GCCGACTATA ACTATAAAGA CACGGAGCTG GTAAACCGCA TACAGGAGCA AACCCAATTT ATCGACTTCC TCGCGTTGCG AAGCATACTG ACGGGGTTGG ATATGACGAG GCCCGGCGGG TCGGTGGCGG CATTTTTGAA CGTATACTTA CCTAAACTTC ATCGCAAATC TTATATTGCT GGCGTTAGAC CTGAAAATGG CGGGTTAGCG AGCCCAGGTG GCTATGTCAT GCGGTCACAG CCTGGCCTCT ACAAAGATGT ATTAGTTCTC GACTTTAAAA GTCTATACCC TTCTATTATA CGTACATTCA AAATTGACCC CATGGGGTTG GCTGAAGGAT TGAAATCGCC TAAACATGCT ATAGAAGGGT TCAAAGGCGC GGTATTCAGT CGTACCTCCC ACTTTTTGCC TACTATCATT GAGAACTTAT GGTTGCAGCG TGACGAGGCG AAAAAGCAAA AGGATGCACC TCGTTCACAA GCGATTAAAA TATTAATGAA TTCGTTTTAC GGTGTACTAG GTAGTGGTGG CTGCCCCTTT TACGATCCCC GCCTTGCGAG TTCTATCACT TTACGTGGAC ATGAGATCAT GCAAACCACT GCCGGATGGA TAGAAGAACT CGGTTATACC GTCATTTACG GTGATACCGA CTCGACCTTT GTTCACGTAG AAGGTAACGG CACATTGGGT ACGCCCACAG AAACGGGTAT TAAGCTTGCA CAAATCATCA ACGAAAAATG GTCGGCACTA CTTAAAGACC GCTATGACAT TGCTTGTCAC TTAGAGATTG AATTCGAGTC TCACTTTTCA ACGTTTTTTA TGCCTACGAT TAGGGGCTCT ACCGAAGGAA GTAAAAAACG TTACGCGGGA ATGAAAGACG GACAACTAAC CTTTAAAGGC TTAGAAAACG TGCGCTCAGA CTGGACAACT CTGGCTAAAA CGTTTCAATA CGAACTGTAC GAACGGGTAT TCACTGGTCA ACCTGTAGAG AGCTATATAA GTGACATGCT AAACGCGGTT AAAGCAGGGG AACTTGATGA TGATTTAGTG TACAAAAAGC GCTTAAGAAA ACCGTTGTCT TCTTATATTA AATCACTTCC CCCCCATGTA AAAGCTGCGC GGCGAGCTGA TGAGCATTTT AAAGAGCAAG GGTTGCCATT GCGCTATCAA ACAAACACAA CAATTGCCTA TGTGATTACA GTTCAAGGCC CGCAGACTGT GGAAACCGCG TTCGTCCCCC TTGACTATGA TCATTATATC GAAAAGCAAA TAAAGCCTAT TGCGGAAAGC ATACTACCTC TTATCTCGTT AAACTTTGAA CAGATTGCTA ACGATCAACT TACCTTATTC TAG
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Protein sequence | MQASSIQQGF ILNKGTFTLR GKVYVELWVK TPTGTVRLIS APQAPTCFVA LEHVEALQSI AQRVPATLDI KNDGFNTLEQ KQVATVKTAT ESHMHQLRQL AREANIVLYE ADIRVADRYL MERFVYGAVE FIGPNAGADS SPTTVIENAQ IRPCHFRTRF SSLSIDIECD EHEMLFSIAL AGEGVNLVLL VCPPTFEKRG VEQRNDKPYQ LLVLNSEKEL LHAFFHHVTS YDPDIILGWN VKQFDMAVLA RRAKANRLKF TLGRHEREAS VRQWEDQTLV DVPGRCVIDG IEALKTMTYQ FESFSLDNVS EALLGENKLI QETDKLAAIK RLYHEDPIAL ADYNYKDTEL VNRIQEQTQF IDFLALRSIL TGLDMTRPGG SVAAFLNVYL PKLHRKSYIA GVRPENGGLA SPGGYVMRSQ PGLYKDVLVL DFKSLYPSII RTFKIDPMGL AEGLKSPKHA IEGFKGAVFS RTSHFLPTII ENLWLQRDEA KKQKDAPRSQ AIKILMNSFY GVLGSGGCPF YDPRLASSIT LRGHEIMQTT AGWIEELGYT VIYGDTDSTF VHVEGNGTLG TPTETGIKLA QIINEKWSAL LKDRYDIACH LEIEFESHFS TFFMPTIRGS TEGSKKRYAG MKDGQLTFKG LENVRSDWTT LAKTFQYELY ERVFTGQPVE SYISDMLNAV KAGELDDDLV YKKRLRKPLS SYIKSLPPHV KAARRADEHF KEQGLPLRYQ TNTTIAYVIT VQGPQTVETA FVPLDYDHYI EKQIKPIAES ILPLISLNFE QIANDQLTLF
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