Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01439 |
Symbol | |
ID | 6779099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1534862 |
End bp | 1535626 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754874 |
Product | Competence lipoprotein ComL |
Protein accession | YP_002125744 |
Protein GI | 196156255 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAT TTCGTCTACT GGCACCCGTT TTACTTGGTG CTATGGTATC TGTCGCAGGA TGTAGCTCTT CGGATAAAGA AGAGAAAGCC GTTTTAGCTA ACATGGGTGC ACAGCAACTG TATGACAGAG CGAAGCAAAG CATGGAAGTC GGGAACTTTA GTGCTGCCGC GCAAACCCTC AGCGCATTAG ACTCGCGCTA CCCGTTTGGT CCTCTATCGC ACCAAGTACA GCTAGACCTT ATCTATAGCT ACTATAAATC GGGTAAGAAC GAAGAAACTC TCGCCACTAT CGATAGATTT ATTCGCTTGA ATCCAAACCA TTCAGATGTT GACTACGCTT ACTATATGCG TGGCTTAACT AACATGGAAT CTGATAGCAA TCTTTTCCAA GAGCTAATGA ATATCGATCG TACGGACAGA GATCCATCGA AGTCTCGCCA AGCGTTTGAA GATTTTCGCA GATTGATTCA GCAGTACCCA GATAGCAAGT ACGCCGCTGA CGCTAAACAG CGTATGGTAC ACATTAAAGA TCGTTTGGCT CGATATGAAA TAGCAATTGC TCGCTTCTAT ATGAGACGCC AAGCGTACGT TGCCGCCGCT AATCGCGGCC GTTACGTGAT TGAACATTTC CCCAATACTA CACAGGTTCA ACAGGCGCTT GAAATCATGG TTTCAAGTTA CGAACAATTG GGGCTTAAAG AGTTGCGTGA TAATGCGATG AAGACGTTAA AGCTTAACTA CCCTGATAGC GAATTTATTA GTTAA
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Protein sequence | MKSFRLLAPV LLGAMVSVAG CSSSDKEEKA VLANMGAQQL YDRAKQSMEV GNFSAAAQTL SALDSRYPFG PLSHQVQLDL IYSYYKSGKN EETLATIDRF IRLNPNHSDV DYAYYMRGLT NMESDSNLFQ ELMNIDRTDR DPSKSRQAFE DFRRLIQQYP DSKYAADAKQ RMVHIKDRLA RYEIAIARFY MRRQAYVAAA NRGRYVIEHF PNTTQVQQAL EIMVSSYEQL GLKELRDNAM KTLKLNYPDS EFIS
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