| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01348 |
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| Symbol | |
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| ID | 6775299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1446061 |
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| End bp | 1447002 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754785 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_002125656 |
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| Protein GI | 196156167 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.256718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAT TAAAATTATC CGAAACCGTT AATTTCATGC GCCTTCGCAT TCCAGCGATG
GTGTTATCTA CAGTCTTAAT CCTTGGCTCG TTTGTGTCAT TAGGGGTAAA CAGTCTTAAC
TGGGGGCTGG ATTTCACTGG CGGTACGCTT ATTGAAGTGG GCTACGAAGA CTCGGCTGAC
CTAGAAGCTA TTCGCGTGCA GCTTAACGAA TCGAACTTTG AAGATGCGAT AGTGCAAAAC
TTCGGTAGCA GTCAAGACGT GCTTATTCGC ATTGCACCGC GTGATGGCGT AAAAGCCGTA
ACCATTGGTG AGCAGGTTCT TGCGGCACTG CGTGCAGATG GCACCTCGGT GGATATGCGC
CGTATTGAGT TTGTTGGACC TAATGTCGGT GAAGAACTGA CAGAGCAGGG CGGGCTAGCA
ATGCTGGTGG CACTGTTATG TATCTTGGTT TACGTGGCGA TGCGTTTTGA ATGGCGCTTT
GCACTGGGTT CCGTTTCGGC ACTTGCCCAT GACGTGATCC TTACGCTAGG TCTATTCTCG
GTACTTCAAA TTGAATTTGA CCTTACGGTG CTTGCAGCTG TACTCGCGGT TATTGGTTAT
TCACTTAACG ATACCATTGT TGTATCAGAC CGTATCCGTG AAAACTTCCG CAAAATTCGT
AAAGGCGAGC CGGTCGAGAT TATCAATATC TCTCTAACGC AGACCCTTAA TCGTACTATC
ATCACCTCAC TAACCACGGT GTTAGTATTG GTTGCCTTGT TCTATAAAGG TGGTGCGCTT
ATTCACGGTT TCGCCACTGC GTTGTTATTC GGTGTAGTAG TAGGTACTTA CTCATCGGTG
TATATCGCAA GTTCGGTTGC CCTAGCATTA GGTATAAGTA AAGAAGACCT AATGCCACCG
CAGGTAGAGA AAGAAGGCGC TGACTTAGAT CCAATGCCTT AA
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| Protein sequence | MQLLKLSETV NFMRLRIPAM VLSTVLILGS FVSLGVNSLN WGLDFTGGTL IEVGYEDSAD
LEAIRVQLNE SNFEDAIVQN FGSSQDVLIR IAPRDGVKAV TIGEQVLAAL RADGTSVDMR
RIEFVGPNVG EELTEQGGLA MLVALLCILV YVAMRFEWRF ALGSVSALAH DVILTLGLFS
VLQIEFDLTV LAAVLAVIGY SLNDTIVVSD RIRENFRKIR KGEPVEIINI SLTQTLNRTI
ITSLTTVLVL VALFYKGGAL IHGFATALLF GVVVGTYSSV YIASSVALAL GISKEDLMPP
QVEKEGADLD PMP
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