Gene MADE_01346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01346 
SymbolyajC 
ID6777088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1443812 
End bp1444150 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content42% 
IMG OID642754783 
Productpreprotein translocase subunit YajC 
Protein accessionYP_002125654 
Protein GI196156165 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.153767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTAT TTATCTCGAA CGCTTACGCG CAATCTGCTG GCGGTGCTCA GCAAGGTGGT 
GGCATGGAAA TGATTATCAT GCTTGCTGTA TTTGGTCTAA TTTTTTACTT CTTGCTTTAT
CGCCCGCAGG CTAAGCGCGT AAAAGAGCAT AAAAACCTCG TGTCTTCACT TGGCAAAGGT
GATGAAGTGC TAACACAAGG TGGTTTAGTA GGTAAAATTA CTAAAGTGTC GGAAGAAAAA
GATTTCATCG AAGTTGCACT TAACGATTCA AACAACATTG TTGTTCAGAA GTCTTCAGTA
ACTGCTGTGC TGCCTAAAGG CACAATGAAG TCACTGTAA
 
Protein sequence
MSLFISNAYA QSAGGAQQGG GMEMIIMLAV FGLIFYFLLY RPQAKRVKEH KNLVSSLGKG 
DEVLTQGGLV GKITKVSEEK DFIEVALNDS NNIVVQKSSV TAVLPKGTMK SL