Gene MADE_01306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01306 
Symbol 
ID6777380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp1399887 
End bp1400987 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content43% 
IMG OID642754743 
ProductGlycosyl transferase, group 1 
Protein accessionYP_002125614 
Protein GI196156125 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT TACAGTTTAT TTGTTCAACG GGCTTCTATG GAGCTGAAAG ATGGATCTTG 
GCACTAAGTA AACATATGCC CCAAGATGTA GAGAATCATT TAGTGGTGAC GCTAGAGCCT 
GGAACCGAAG ATTTAGAGCT TTTAAAGCAG TTTTCTTCGT TGGGCCAAAC CCACCAGATA 
GCAATGCGCA ATCGTTTTGA CTTAGGCGCT ATTTCAAAGC TTGCAGAACT TATTAGGCGC 
CATGGTATTG ATGTGATTCA TACCCACGGG TACAAATCAG ATATTTTGGG CGTATTAGCA 
GCAAGAAAAG CGGGGATCCC TTGCGTTGTA ACGCCCCATG GCTTTGAAAA TGCTGCGGAT 
ATCAAGTTAC GGACCTTTAT CTGGCTAGGC TGCCAATCAA TGCGATTAGC AGACAAAGTT 
GTGCCGCTAT CAAAACAGCT TATGGAAGAC GTAAAGAAAT TTGGCATTAA ACCGCCGAAG 
CTTGAGTATA TTCAAAACGG TGTCGACCTA TCCGAGGTTG ACGCTGTAAG AGAAACTAAA 
GTCGTCAAAC CTGCGGGTGA GAAAAAGCGC ATAGGCTTTG TGGGTCAAAT GATTAGCCGA 
AAGAATATCA AAGCAATACT GGATTGTTTT GACGTGCTTT ACGCTCAACG ACAAGATATC 
GAACTAATAC TGCTCGGAGA CGGTGATAGC AGGCAAGAAT TGGAAGCATA TAGCGAAACC 
TTATCAAGCG TAAACGCTAT TCAATTCTTA GGGTTCCGTG ACGATAGGCT CGAATTACTC 
AAAGATTTTG ACTTATTCGT TATGACATCA ACGCTGGAAG GCATTCCTCG CTGTCTGATG 
GAAGCGTGCG CAATGGAAAT TCCAGTATCG GCGTACGACA TCGCAGGCAT AGACCAGTTG 
ATTACGCATA AAAAAACGGG GTTACTGGCA TCTTTACATG ATTTTGAACA GCTGCAAAAG 
GACTGGATAA CGCTATTAGA CGATAACGAC TATGCAACAC GTCTAGCGCG GGTATCACGT 
CAATTTGTTG AAGATAGTTT TTCAGCGAAA AGAATGGCCA GCGAGTACTA TTCACTCTTC 
AAAAAAATGT TAACTGAGTA A
 
Protein sequence
MKVLQFICST GFYGAERWIL ALSKHMPQDV ENHLVVTLEP GTEDLELLKQ FSSLGQTHQI 
AMRNRFDLGA ISKLAELIRR HGIDVIHTHG YKSDILGVLA ARKAGIPCVV TPHGFENAAD 
IKLRTFIWLG CQSMRLADKV VPLSKQLMED VKKFGIKPPK LEYIQNGVDL SEVDAVRETK 
VVKPAGEKKR IGFVGQMISR KNIKAILDCF DVLYAQRQDI ELILLGDGDS RQELEAYSET 
LSSVNAIQFL GFRDDRLELL KDFDLFVMTS TLEGIPRCLM EACAMEIPVS AYDIAGIDQL 
ITHKKTGLLA SLHDFEQLQK DWITLLDDND YATRLARVSR QFVEDSFSAK RMASEYYSLF 
KKMLTE