Gene MADE_01201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01201 
Symbol 
ID6778073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1281223 
End bp1282431 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content47% 
IMG OID642754638 
Producterythronate-4-phosphate dehydrogenase 
Protein accessionYP_002125509 
Protein GI196156020 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TTCTTGAAGA TACCATTCCG TTTGGCACCG ATTACCTTAA TAGCGTAGGT 
GAGGTTGAAA CCTATGCATG GCAATCTCTT GTGCCTGAAA TGCTGCGCGA TGTAGATATT
CTTGCGCTAC GTTCTACCAC CAAGGTTACC CCTGAACTGC TGATCAGCGC TAGCAAGCTC
AAGTTTGTTA CTACGGCAAC GGCGGGGATA AATCATCTAG ATAAAACGCA TTTAGATAGC
GTGGGTATTA TGCATAGCAG TGCAGCAGGC TGTAATGCCG TAGCGGTTGC CGAATACGTG
TTGAGTGCTT TGCTGCACGC GCAAAAAGCC CAAAAGCTTG ATTTATATAA TGCGACAGTG
GGAATAGTAG GCGCTGGTAA TGTGGGGACT GCACTATCAC GTATTTTAAC GGCAGTTGGC
ATTGAACACT GCTTGTACGA CCCTCCGCTA CAGCAAGCGT TAGCCGGTAC TGGTAAAACG
AAGCATAACG GGCAGTCATT TGTAGATTTA GCACAAATAG CACAGTGCGA CGTTATTTCG
CTTCACGTGC CTTTTATTAA AGGCGGCGAT TATCCCACCT ATCAGATGAT CGACAAGACA
TTTCTGGAAG GATTAACGTC AAACCAACTG CTTATCAATG CATGCCGAGG CGAGGTTATC
GATGAAGCAG CACTGCTTAG CGTACTTCAA GGGGAAAAAT CGCCAACGGT AGTACTCGAT
GTATTCGATA ATGAACCTGC CATAAACACA GCACTATTTG ATTATGTTTG GTTTGTTACG
CCACATATTG CGGGTCATTC TGTAGAAGGC AAAGTTCGCG GTACGCAAAT GATTTACGAA
CAAATTTGTG AGGTAGTGGG TACAGCACCA AACAAAGCGC TTAGCGACTT TTTAGAGAAG
ACCAACCCGA TCAAAGCTGC GTTAAATTCG CCCGAGGCAA CGCGGTTGTC GGTTGATGAT
CTCATTGCCG TATTCCACAA TGTGTATGAC GTTGCCATAG ACGATGAGAT AACGCGAAAC
GCATTTGCGT TAACGTCGGG CCATGATGAA ACGCCAGACG CACACATTGC GAATACGTTC
TCGGCACTGC GCAAGCAATA CAGAGTGCGT CGCGAGTGCA GCGCCTATGC GTTACACTTG
CCACAGAACA CCAGTAAGCA AATTCAAAAC ACATTCACCG AGCTTGGCTT TCAGGTAAGC
TTGGTTTAG
 
Protein sequence
MKILLEDTIP FGTDYLNSVG EVETYAWQSL VPEMLRDVDI LALRSTTKVT PELLISASKL 
KFVTTATAGI NHLDKTHLDS VGIMHSSAAG CNAVAVAEYV LSALLHAQKA QKLDLYNATV
GIVGAGNVGT ALSRILTAVG IEHCLYDPPL QQALAGTGKT KHNGQSFVDL AQIAQCDVIS
LHVPFIKGGD YPTYQMIDKT FLEGLTSNQL LINACRGEVI DEAALLSVLQ GEKSPTVVLD
VFDNEPAINT ALFDYVWFVT PHIAGHSVEG KVRGTQMIYE QICEVVGTAP NKALSDFLEK
TNPIKAALNS PEATRLSVDD LIAVFHNVYD VAIDDEITRN AFALTSGHDE TPDAHIANTF
SALRKQYRVR RECSAYALHL PQNTSKQIQN TFTELGFQVS LV