Gene MADE_01162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01162 
Symbol 
ID6778442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp1238780 
End bp1239385 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content48% 
IMG OID642754599 
Producttranscription regulator, TetR family protein 
Protein accessionYP_002125470 
Protein GI196155981 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATG CAGTACAAAG CTATCATCAC GGCGATTTGC GAAGTGCGCT GTTAGAAGCC 
GCCACGGCGC GGTTATCTCA GCACGGTGTT GATAGTTTAT CCCTTCGAAA ACTGGCAGAA 
GACGCCGGAG TCTCGCGAAC TGCACCCTAT CATCATTTTA AAGATAAAAG CGCCTTGTTA 
AGCGCCATCG CGGCAAAAGG GTTTAGCGAC TGGCATTCAA CGGCCAAGCG TATATTTGAG 
CAAGAAGACA AAACACCGCA AGCGCGTTTT CGTGAGTTTG TTCACGAGTA CATCGGCTAC 
GCCGCCGACA ACCCCGAAAT GTATGAACTC ATGTTTGGTC GCACTATTTG GCAGAACCAA 
GCTGCGACAA GCGACCTTAA AGAAGTGGCG TTTCCGTGTT TTCAGTTTCA GGTAACTATG 
ACACGCTATT GGCAAGAAAA AGGCTTGCTG CCAAATAATC AAAATGCTCT TCGTTTAGCC 
CAGGTTACGT GGGGCACGTT ACATGGTATT GCCAGACTGT TGATAGACGG TATTTATGCC 
GACAGCAGCC ACATCGAAGA AATGTGCGAC TGTGCTGCCG ACCTTTTTAT GCAAAAAACT 
AATTAG
 
Protein sequence
MANAVQSYHH GDLRSALLEA ATARLSQHGV DSLSLRKLAE DAGVSRTAPY HHFKDKSALL 
SAIAAKGFSD WHSTAKRIFE QEDKTPQARF REFVHEYIGY AADNPEMYEL MFGRTIWQNQ 
AATSDLKEVA FPCFQFQVTM TRYWQEKGLL PNNQNALRLA QVTWGTLHGI ARLLIDGIYA 
DSSHIEEMCD CAADLFMQKT N