| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01137 |
|---|
| Symbol | |
|---|
| ID | 6776185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1213731 |
|---|
| End bp | 1215383 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642754574 |
|---|
| Product | acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme |
|---|
| Protein accession | YP_002125445 |
|---|
| Protein GI | 196155956 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00114592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA CCTGGCTTAA GCATTACGAC CCTCGCGTTT CCGCAGAAAT TGATGCCGAT
CGTTACGCAT CTGTAGTAGA CATTTTCGAG CAGTCGGTAA AGAAGTTTAA AAATAAAGAA
GCCTTCATTA ACATGGGGCA TTCAATTTCG TTTGAGGAGC TAGATACGCT TTCAGCTCAA
TTTGCTGCTT ACTTACAAGC AAGCGGGCTT AAGCGCGGTG ATGCGGTGGC AATTATGATG
CCTAACCTTC TCCAATATCC TGTCGCCATG TTTGGTATTT TGCGCGCAGG TATGGTGGTG
GTGAATGTAA ACCCGCTCTA CACGGCCAGA GAACTAAAGC ATCAACTTAA CGACGCCAAT
GCTAAAGCCA TTGTAATTGT TGAAAACTTT GCATGTACTC TTGAAGAAGT GATTGCAGAT
ACAAACCTTC AAGAAGTCTT TTTGACCGCA CTGGGCGACA TGTTGCCTGC ACCGAAGCGC
TGGATTGTTA ATGCAGTAGT TAAATACGTC AAAAAGATGG TGCCTTCCTT CACCTTGCCT
GAAACTACTT CTTTCATGTC GGCAGTTAAA AAAGGTCAGT CGCTTAAATA CACGCGACCT
GAGATTGATA GCGGCGATAT CGCGTTCTTG CAATATACAG GTGGGACAAC GGGCGTATCG
AAAGGCGCAA TGCTAACACA CCGCAATATG GTGGCAAACC TAGAGCAGGT CTCGGGTATT
TTAGAAACCG TAATTGAAGA AGGTGAAGAT TTTGTTGTAA CAGCACTACC GCTTTACCAC
ATCTTTGCGT TACTGGCTAA CTGCCTGATG TTCGTTAAAT ACGGTTGTCG CAACTTGCTT
ATTACTAACC CGCGAGACAT GCCGGCGTTT GTAAACGAAC TAAGCAAATA CCCGTTCACC
ATTTTGCCTG GCGTAAACAC CTTGTTTAAT GGTCTTTTGA ATACACCAGG GTTTGACGAG
CTTGATTTTA GCAAGTTCAA ATTTGGTCTA GGTGGCGGCA TGGCGGTACA GCAACCTGTT
GCCGAAAAGT GGGAAAAGGT TACGGGCACG GTGTTGTTAG AGGGTTATGG CCTTACTGAA
TGTTCGCCTG TGGTAGCGGT AAACCCACCT CAAATTGAAG CCTATAAAGG CGCAATTGGT
ATGCCGGTAC CTTCTACTGA CATTAAGTTA TTAGACGACG ATGGCAATCC AGTTGAAAAA
GGTGAGCCAG GCGAAATGTG GGTTAAAGGC CCGCAGGTGA TGAAGGGATA TTTGAACCGC
CCTGAAGCGA CAGAAGATAT TCTAAAAGAG GGTTGGCTAG CCACTGGCGA TATTGCTACC
GTAGATGATG AAGGTTACTT CTATATTGTT GACCGTAAAA AGGATATGAT CCTAGTCTCA
GGCTTTAACG TGTTCCCTAA CGAAATCGAA GAAGTCGCTG CTATGCACGA TCACATCGTT
GAAGCGGCTG CGGTTGGGGT TCCTCATGAG GTTAGCGGCG AGGTTGTGAA GTTGTTTGTG
GTTAAAAACA ACGACGCGCT GACTGAGAAA GACGTTATCG CGCACTGCCG TAACCACTTA
ACGGGTTACA AAGTGCCTAA GCAAGTTGTT TTCAAAGACG ACTTACCAAA AACCAATGTA
GGTAAAATTC TGCGTCGGGA GCTTCGAGAC TAG
|
|---|
| Protein sequence | MEKTWLKHYD PRVSAEIDAD RYASVVDIFE QSVKKFKNKE AFINMGHSIS FEELDTLSAQ
FAAYLQASGL KRGDAVAIMM PNLLQYPVAM FGILRAGMVV VNVNPLYTAR ELKHQLNDAN
AKAIVIVENF ACTLEEVIAD TNLQEVFLTA LGDMLPAPKR WIVNAVVKYV KKMVPSFTLP
ETTSFMSAVK KGQSLKYTRP EIDSGDIAFL QYTGGTTGVS KGAMLTHRNM VANLEQVSGI
LETVIEEGED FVVTALPLYH IFALLANCLM FVKYGCRNLL ITNPRDMPAF VNELSKYPFT
ILPGVNTLFN GLLNTPGFDE LDFSKFKFGL GGGMAVQQPV AEKWEKVTGT VLLEGYGLTE
CSPVVAVNPP QIEAYKGAIG MPVPSTDIKL LDDDGNPVEK GEPGEMWVKG PQVMKGYLNR
PEATEDILKE GWLATGDIAT VDDEGYFYIV DRKKDMILVS GFNVFPNEIE EVAAMHDHIV
EAAAVGVPHE VSGEVVKLFV VKNNDALTEK DVIAHCRNHL TGYKVPKQVV FKDDLPKTNV
GKILRRELRD
|
|---|
| |