Gene MADE_01131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01131 
Symbol 
ID6775201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1208519 
End bp1210438 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content49% 
IMG OID642754568 
ProductATP-dependent helicase 
Protein accessionYP_002125439 
Protein GI196155950 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.625206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAA TAAACAATGT ATTTTCTTCA GATGGCCTTC TTGCCAGTGC TATTAAAGGC 
TTTGTGCCTC GCGAAGCACA AACTGAAATG GCTAAAGCCG TTAAGCATGC CATTGAAACC
ACGGGCAGTT TAATTGTTGA AGCAGGTACA GGTACGGGAA AGACGTTTGC GTATTTGGCG
CCTGCTTTAT TGAGCGATGG CAAAGCGATT GTCTCGACCG GCACGAAAAA CCTTCAAGAA
CAGCTCTTTC ATCGCGATCT CCCCCTCGTT AAAAAAGCGC TTGGCAGTAA GCGTAAAACC
GCACTGTTAA AAGGCCGCGC CAATTACCTT TGTCTTCACC GGCTTGCGCA GCACGGCGGC
AATTCTACGC TGGTTGAAAA AGACGTGTTG GGGCAGCTTT CAGAAGTTAA GCGTTGGTCG
AGCACCACGA AGACCGGGGA TATGGGCGAG TTAAAAACGC TGCCAGAAGA TGCCCGAGTA
CTGCCGTTAG TGACGTCTAC CGTGGATAAT TGTTTAGGCC GGGACTGCCC TGACTACGAA
GACTGCTATT TGGTTAAAGC GCGCAGAAAG GCGCTGGATG CCGACATTAT CGTGGTTAAC
CACCACCTTT TCTTTGCCGA TATGGCGCTA AAAGATACCG GTTTTGGAGA ACTTATTCCC
GAGGCCGATG CCATCATCTT TGATGAAGCG CACCAAATTC CAGATATTGC CAGCGACTAT
TTTGGTGAAT CGCTTTCAAC ACGGCAAATT CACGATATCG CGAAAGACAT CACCTTGTTG
TTTAGGACCG TATTGAAAGA TGCGGGTCAA CTAGATAAAG CCGCCGACAA GTGCAGAATG
ATTGCTTCTG ACTTACGGTT GCTGTTTCCC GATACCGCAG AGCGCGGCAA CTGGGCAGAG
GCATTAGACC GAGATGATGT GCGTATGCAG GTAGGTAAAC TTGCTGAAGC CCTTGGCGTG
CTGCACGAGG TGTGTAAGCT GCATATCGGG CGCGATAAAG ATTTAGACAA TATGTATGAA
CGGGTTGTGG CTGCAAGAGA GCAGCTAGAC GCGCTCAGTG ACAATAAGCA AGAAAATGTC
AGCTTATGGT ATGAAACTAC GCAACGTCAT TTGATCATGC ACCTCACGCC ATTGTCGATA
GCGGCCAAAT TTAGACGGTT TGTGTCATCT CCCCCTCGCG GGTGGATTTT TACCTCGGCA
ACGCTAATGG TCAATGGTGG ATTTGATCAC TTCCAGCGTC GAATGGGGTT AGAGGATGCT
GAAACCTTAG GGTTAGACAG CCCATTTAAC TACCCCGAAC AAGCCATGCT TTGTGTGCCT
CGTTATTTAC CAGAGCCCAA TAGTTATGCC ATGCGGGAAA CGCTTCTCGA AACGGCCAAG
CGGTTGATTA AAGCAAGTCG TGGTCGCTGC TTCTTACTGT TTACCAGCCA TGCGATGCTT
AGAGAAATTG CACAAAAGCT GGAGGATGAG GTAGACAACC CGCTGCTAGT ACAAGGTACT
ACAACAAAAC AAGCACTGTT GGATGCCTAT CTTGCTGATG AAAAAGCGGT GTTAATGGGC
ACGGGGGCAT TCTGGGAAGG GGTAGACGTA CGCGGTAATG ACCTTGTTTG TGTCATGATT
GATAAATTGC CCTTTGCATC ACCGGACGAC CCGCTGCTTC AGGCCCGTAT GGAAGACGTT
AAAAAGCGTG GCGCAAACCC GTTTGGTGTT ATACAGATCC CTCAGGCTGT TATTACGCTA
AAGCAGGGAG CAGGGCGCTT AATTCGAGAC CCGTCAGATA AGGGCGTACT GGTTATTTGT
GATAACCGTT TGGTTACCAA GCCCTACGCG AAAACCTTTG TTGGCAGTCT GCCTGACATG
AAGCGCACCA GAAGTTTAGA CGAAGTAGAA AAATTTTTAG CCGGCATTGA TGAAGCCTAA
 
Protein sequence
MPTINNVFSS DGLLASAIKG FVPREAQTEM AKAVKHAIET TGSLIVEAGT GTGKTFAYLA 
PALLSDGKAI VSTGTKNLQE QLFHRDLPLV KKALGSKRKT ALLKGRANYL CLHRLAQHGG
NSTLVEKDVL GQLSEVKRWS STTKTGDMGE LKTLPEDARV LPLVTSTVDN CLGRDCPDYE
DCYLVKARRK ALDADIIVVN HHLFFADMAL KDTGFGELIP EADAIIFDEA HQIPDIASDY
FGESLSTRQI HDIAKDITLL FRTVLKDAGQ LDKAADKCRM IASDLRLLFP DTAERGNWAE
ALDRDDVRMQ VGKLAEALGV LHEVCKLHIG RDKDLDNMYE RVVAAREQLD ALSDNKQENV
SLWYETTQRH LIMHLTPLSI AAKFRRFVSS PPRGWIFTSA TLMVNGGFDH FQRRMGLEDA
ETLGLDSPFN YPEQAMLCVP RYLPEPNSYA MRETLLETAK RLIKASRGRC FLLFTSHAML
REIAQKLEDE VDNPLLVQGT TTKQALLDAY LADEKAVLMG TGAFWEGVDV RGNDLVCVMI
DKLPFASPDD PLLQARMEDV KKRGANPFGV IQIPQAVITL KQGAGRLIRD PSDKGVLVIC
DNRLVTKPYA KTFVGSLPDM KRTRSLDEVE KFLAGIDEA