Gene MADE_01085 details

Gene Information

• Locus tag: MADE_01085
• ID: 6778654
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 1149874
• End bp: 1151892
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 642754517
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_002125393
• Protein GI: 196155904
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0241745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGTGC CCATGCAGTT AACAATTATA AATAAAATTA CGCTTGGCTT TGGTCTATTC 
GGCTGCTTAC TTTTACTCAC TAGTATTCTT TCCTATTTCG GTCTTAGCGG CATTAAGGAT 
TCTGCGCTGG ATGTTGTAGA GCAGAAAATG CCGGTGCAAA CCAGCATGGT CAAGGTTAAA 
ACCGAAATCT TGTCGCTATC TGTAATAACA GCTAACGGTT ATCACGTTGA AGATATTGCT 
GAGCTATCAG CGAATAAATC GACATTTGAT ACTTTATCAT CGGCGTTTTC CGATGATCTC 
TCGCGCCTAA AATCACTTAT GCCGAAAAAT GCGGTAGCGA CGAATGCGGT GGAAGTAAGC 
TTGGCCTACG TAAGTAGTAG TAACCAAATG TATGACGCCA TCAACGAGCG AATGAACATT 
GAAAAAGCCC TTGCTGGTCA ACTGGAAAAA GTACTAATGA CAGCCGATGA GGCCAGTGCA 
TTAATGCTGG ATCTCTCTTA CCTAGAAAGC AGCGACCCCA GTATTGAAAC ACTCATCGGA 
GCGGGTACCG CTATCGACAA TAAACTTCTC ACAATGAACG ATTCATTCAT TGAGTTAGCC 
GAGACACATA ACGCAGAGCA AAGCGCCAAT ATTATTGAAG ATTTAGAATA TCAGTTAAGT 
AACCTTCAAG TAGATAAAGA CTACGTGAAC CGGCTTGCCA CAGGTATTGA TGATGGCGGT 
ACAATTGATG CGTTCAACGA ACAATATAAT TTACTTATCG ATGCGGTGAA GGGGGCAAAT 
GGCCTTATTG CTCTGCAGCT GCAAAAGCTC GCAGAGGTTG AAAAAGCGAC GCAGGCACAA 
AAGCGTGCGA AAGAAGCATT ACAAACAGCA TTAACAGACA TTAACACCTT GTTTGATTCG 
GTGCAGACTC AGTCGCTTGA AGGGCAAAAC GCAATTCTTG AGTCAGTCCA GGCAAATTTA 
GTTCGAAACA TTATTGTGGC GGCGCTGGGG TTAACCGCGG CTATTTTCTT AGCCGTTATT 
GTAACCCGAA GCATTTCGAA ACCACTTGGT CGGATCAACA AGGGGTTAAG TCAGCTTAGC 
AAAGGGGATT TGAGCACCAC ACTGCCGCAA GAGGGCAATG ACGAATTTTC AGCGCTATCT 
GCAAAGGTAA ATAGCTTAAC AGAAAGCTTA AGGGAGCTTG TTGGCAATAT TTTAGAGCAA 
GAGAAGCGGT TAATTGAAAT TACGAAAGAA AGCGTAGAGC TTGGTAACAA GAGCTTGTCG 
GAAGTAGATA AGCAGCGCGA GCAAGTCACT GTGACCTCAA CCAATACGAA AAATGTCCAA 
GATAAAAGCC GAAGTAATTT GGCTCAAATT AATGACGCCA TGGAGGCGCT ACGGGATATT 
ACTCATCAAA GTACAGACAT CGGGCAATTA GTTGAGAGAA ACCGTCAGCA AGTAGGAAAT 
CAAGCTGAAC AAGCGGAATC GTCAGCACAA ATTATCGGGC GATTAGATGA TAACTCGCGA 
AGTATTGGTA GCATTTTGGA TGTGATTAAA ACCATCGCAG AGCAAACCAA CTTGTTGGCA 
TTAAATGCAG CGATAGAAGC AGCGCGGGCC GGTGAGCAGG GGAGGGGCTT TGCGGTAGTC 
GCAGATGAAG TACGCACCTT AGCAAACCGC ACGCACGACT CTACCGAAGA GATTGAGCAA 
ATGATTGGAA ACTTGCAAAA AGATGCGGCT GAGGCTGTCA AAGCTATAAA TGCTGGGCGT 
GAGCAAGCGC AAGAGGGTGT GCAAATAACG CAACAGGTTT CACAGCAAGT AGAAAGTATT 
CGTGAAATTA TTGAGCGTTT AAGTGACATA AATGAGCATA TTGTAGCCGA TACTGAGCAA 
CAGGATGTAC TGCTCGGCGA AGTGGCTAAT AGCTTGAACC GCATTGTAGC GCTTGCCGAT 
TCAAGTGCGC AAAGCACTAG GCAGTCTAAT GAATCAACCA TGATGCTAGA TGCCCAAACA 
GAAAGTTTGA GAAAGGCGGT AGAACGGTTT CACTTATAG 

 

Protein sequence

MEVPMQLTII NKITLGFGLF GCLLLLTSIL SYFGLSGIKD SALDVVEQKM PVQTSMVKVK 
TEILSLSVIT ANGYHVEDIA ELSANKSTFD TLSSAFSDDL SRLKSLMPKN AVATNAVEVS 
LAYVSSSNQM YDAINERMNI EKALAGQLEK VLMTADEASA LMLDLSYLES SDPSIETLIG 
AGTAIDNKLL TMNDSFIELA ETHNAEQSAN IIEDLEYQLS NLQVDKDYVN RLATGIDDGG 
TIDAFNEQYN LLIDAVKGAN GLIALQLQKL AEVEKATQAQ KRAKEALQTA LTDINTLFDS 
VQTQSLEGQN AILESVQANL VRNIIVAALG LTAAIFLAVI VTRSISKPLG RINKGLSQLS 
KGDLSTTLPQ EGNDEFSALS AKVNSLTESL RELVGNILEQ EKRLIEITKE SVELGNKSLS 
EVDKQREQVT VTSTNTKNVQ DKSRSNLAQI NDAMEALRDI THQSTDIGQL VERNRQQVGN 
QAEQAESSAQ IIGRLDDNSR SIGSILDVIK TIAEQTNLLA LNAAIEAARA GEQGRGFAVV 
ADEVRTLANR THDSTEEIEQ MIGNLQKDAA EAVKAINAGR EQAQEGVQIT QQVSQQVESI 
REIIERLSDI NEHIVADTEQ QDVLLGEVAN SLNRIVALAD SSAQSTRQSN ESTMMLDAQT 
ESLRKAVERF HL