Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01041 |
Symbol | |
ID | 6776272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1103324 |
End bp | 1104556 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754473 |
Product | probable aspartate aminotransferase |
Protein accession | YP_002125349 |
Protein GI | 196155860 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGTT TAATTTTGAA GTTTACTTCT CGCGCTACCG CTATTTCTCC GTTTCTCGCC ATGGCCTACG GTGAAAAAGC CACAGTACTT GAACAGCAAG GTAAAGACGT TATTCGACTA AATCTTGGTG AGCCTGATTT CGGCGCACCC GCACCCGTAC TTGCGGCAAT GAAAGAAAGC ATGGACACCC CTGATTTTCC CTATACCTCT GCATTGGGTA TTCCTGAACT ACGCCAAGCA GTTGCTAGCT TTTACGAAAC TAAACACGGC GTAAAGATAA GCCCTTCACG CGTGGTCGTA ACCGCTGGCG CGTCTGGTGC GTTACTTTTG GCAAGCGCAG CATTGGTTGA GCCAGGCGAC AACGTGATTT TGGGCGACCC GTCTTACCCG TGTAATCGAC GCTTTTTAAA CGCATTTGGC GCAGAGGTAA CGCTAGTACC AACACGCAGT GAGGATAATT TTCAGCTAAC CGCAGCAAGT GTTGCAGACA ATTGGAAGCA GAACACCAAA GGTGTACTTA TCGCCACACC AGCCAATCCA ACAGGCACGG CGATAGATAA AGACGAACTG TATAAGATTG GACAATACTG CAAAGCCAAG GGTGGCTTTT TAATTGTTGA TGAAATTTAC TTAGATCTTT CGCTTTCTGC CGATGTTGAT TCTACAGATT CCCAAGCAAC CCACAACACC GACACTAAAC TTCAAACCGT GCTTGCCAGC GCAGACTTGC AAGATACCGT GGTAGTCATT AACAGTTTCT CTAAGTACTT TGGTATGACG GGTTGGCGTC TTGGTTGGTG CGTAGTGCCT GAAGCAATGA CACCCGTCAT TGAAAAGCTC GCGCAGAATT TGTTTATCTG CCCCTCTACC CTTTCTCAAA AAGCCGCACT TGCGTGCTTT ACCCCTGAAG CGTTGGCGCA GTGCGAGCAA AACCGCAATA CGCTGATAGA GCGTGCAACT CTTGTTTTTG ATGCACTTCA AAATATGGGG CTTAGTTTAG ATGCAAAGCC TGACGGCGCG TTTTACGCTT ACATCAATAT CAAACATACA GGCATAAGTG CTATCGAATT CTGTGATGCC CTGCTCTCGC AATATTATGT GGCGCTTACG CCGGGTAATG ATTTTGGCGA ACACAATGCT GATCAGTACG TAAGGCTGTC TTTCGCTACC AGCATTGAAC GTTTGAATGA AGGCCTGTCG CGGCTAGCAA AGTTCGTTGA ATCATTAGGC TAA
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Protein sequence | MKGLILKFTS RATAISPFLA MAYGEKATVL EQQGKDVIRL NLGEPDFGAP APVLAAMKES MDTPDFPYTS ALGIPELRQA VASFYETKHG VKISPSRVVV TAGASGALLL ASAALVEPGD NVILGDPSYP CNRRFLNAFG AEVTLVPTRS EDNFQLTAAS VADNWKQNTK GVLIATPANP TGTAIDKDEL YKIGQYCKAK GGFLIVDEIY LDLSLSADVD STDSQATHNT DTKLQTVLAS ADLQDTVVVI NSFSKYFGMT GWRLGWCVVP EAMTPVIEKL AQNLFICPST LSQKAALACF TPEALAQCEQ NRNTLIERAT LVFDALQNMG LSLDAKPDGA FYAYINIKHT GISAIEFCDA LLSQYYVALT PGNDFGEHNA DQYVRLSFAT SIERLNEGLS RLAKFVESLG
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