Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01001 |
Symbol | |
ID | 6776360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1049538 |
End bp | 1051697 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754433 |
Product | Prolyl endopeptidase |
Protein accession | YP_002125309 |
Protein GI | 196155820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA AACTAATATA CGCAGCCGTG GTTGCAGCAT CTGCAGGGGT AACCTTTGCT TGTTCAACGT CCTACAGTAA CAATGCAGAG CCGGCGAAAA GCGAGATGCA ACATACAGCG ATGCCGACAG TGTCTAGCTA TCCAGAAACA AAAACCGTCG CGCAGCAGGA CAATTATCAC GGTACTACAG TGAGCGACCC TTATCGCTGG CTAGAAGAAG AAAGTGAAGA GGTAAACGCG TGGGTAGAGG CCCAAAACGA GCTTGCTCGT CCTTATCTAG CTGAGCTATC TTCTAAAGCG TTGTACAAAG AGCGTTTAAC CGCATTGTGG GATTATGAAA AGTATTCAAC GCCCTACATG GTAAATGACA AACTCTTCTA TACGTATAAC AACGGATTGC AAAACCAATA TGTCCTCTAT ATGGCTGATG GGCTAAACGG TAAGCCTGAA GTGCTCATTG ACCCCAACAC CCTAAGTGAT GATGGCACTG TATCGATGGC GTCAACTGAA CTAAGCCCGA AAGCGTCGTA TCTTGCATAC ATGCTATCCG ACGGTGGTAC AGACTGGAAA ACCATTCATA TACGTGAAAC CAGCAACAAA TCAGATTTAA CCGATGTTAT TAAAGGGGTT AAATTTTCAA ACGTAGCGTG GCTACCTGAC GAAAGTGGTT TTTTCTATTC GCGTTACCCA GAAAATGACG CAGGTGAGTT TGACGATAGC CAAACCGTGT CTATTTATTT TCACGCAATA GGCACAGCGC AAAATGAAGA TACAAAAGTG TTCTCATTTG ACGGCAAACC TACCTGGAAC CCATACCCAC TGGTTATTCA AGACGGTGAA ACACTATTAA TCTCGGTATT TGAAGGCTAT GAAGCCAATG GGGTATACGC TAAGTCGCTA AAAGAAAAAA ACAGTAAGTT GATACCAATC TTTGATAAGT GGGATGGTCG CTACGATTTT ATTGGTGAAA AAGAAGACAC GCTTTTCTTT ACATCAACGG CCGATGCGCC AACAGGTAAG GTTGTAAAGG TTGAGTTCGA CAATGGCGTT CAGTCAAGCG AAACTGTTAT TGAAAGTACG TCAGATACCT TAAATAGTGT ATCGCTATTA GGTGGTAAGT TATTCGCTCA GTACCTTAAA GATGTAAAAG GGCAAGTGAG TGTATTTGAC TTGTCTGGCA AACAAATTGA TGACATTTCG TTTTCTGATA TTGGCAGCGT AAACGGCTTT TATGGAGATG AAACTGCCGA CACGACGTTT TACAAGTTAA CGGGCTTCAC TAATCCTGGC CAAGTTTACG CTTATGATGT TCAAAGCGGC GAGTCAACAT TATTTAAGCG CATAGATACT GGCATTAACT ATGATGATTA TGTAACCAAG CAAGTCTTTT ACACCAGTAA AGATGGCACC AAAGTGCCTA TGTTTATTGT ACATAAGAAA GGATTAAAGC TTGATGGGAA TAATAAAACC TTACTGTATG GCTACGGTGG CTTTAATATT TCACTAAAAC CCGGCTACTC AGTGTCCAGA ATGGTATGGG TTGAGCAAGG CAATGTGCTT GCCATCGCTA ACTTGCGAGG AGGTGGTGAG TATGGCCAGC AATGGCACAA AGCGGGAACT AAGTTAAATA AGCAAAACGT GTTTGATGAT TTTATTGCTG CAGGGGAGTA CCTAGTCGAA AGTGGTTATA CCAACCCTCA AAAAATGGGA ATTCAAGGCG GCTCTAACGG TGGCTTGCTG GTTGGTGCAA CGTTAACGCA GCGCCCCGAT CTTTTCGCTG CCGCCTTACC GGCTGTAGGG GTACTAGATA TGCTTCGCTA TCACACGCCA AGCGCTAATG CTCGCGCATG GTCGTCTGAT TATGGTTTGA GTGAAAACAA CGACGAATTT GAAGCCTTGT ATGCTTATTC TCCTGTTCAC AATACAAAAC CTGGAACCTG TTATCCGGCA ACCTTGGTTA CTACTGGCGA TCACGATGAC CGCGTAGTTC CTTGGCATAG CTATAAATTT GCGGCACAAC TTCAAGCCGA TCAAGGCTGC GATAACCCCG TATTACTTCG TGTTGAAACC CGTGCAGGCC ACGGCGCTGG TACACCAACG TGGATGCGTA TTGAAGGCTA TGCTGACCAG TGGGCATTTT TAGAATCGGC CCTCGAATAA
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Protein sequence | MKKKLIYAAV VAASAGVTFA CSTSYSNNAE PAKSEMQHTA MPTVSSYPET KTVAQQDNYH GTTVSDPYRW LEEESEEVNA WVEAQNELAR PYLAELSSKA LYKERLTALW DYEKYSTPYM VNDKLFYTYN NGLQNQYVLY MADGLNGKPE VLIDPNTLSD DGTVSMASTE LSPKASYLAY MLSDGGTDWK TIHIRETSNK SDLTDVIKGV KFSNVAWLPD ESGFFYSRYP ENDAGEFDDS QTVSIYFHAI GTAQNEDTKV FSFDGKPTWN PYPLVIQDGE TLLISVFEGY EANGVYAKSL KEKNSKLIPI FDKWDGRYDF IGEKEDTLFF TSTADAPTGK VVKVEFDNGV QSSETVIEST SDTLNSVSLL GGKLFAQYLK DVKGQVSVFD LSGKQIDDIS FSDIGSVNGF YGDETADTTF YKLTGFTNPG QVYAYDVQSG ESTLFKRIDT GINYDDYVTK QVFYTSKDGT KVPMFIVHKK GLKLDGNNKT LLYGYGGFNI SLKPGYSVSR MVWVEQGNVL AIANLRGGGE YGQQWHKAGT KLNKQNVFDD FIAAGEYLVE SGYTNPQKMG IQGGSNGGLL VGATLTQRPD LFAAALPAVG VLDMLRYHTP SANARAWSSD YGLSENNDEF EALYAYSPVH NTKPGTCYPA TLVTTGDHDD RVVPWHSYKF AAQLQADQGC DNPVLLRVET RAGHGAGTPT WMRIEGYADQ WAFLESALE
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