| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00958 |
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| Symbol | secY |
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| ID | 6776421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1001096 |
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| End bp | 1002400 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754390 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_002125266 |
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| Protein GI | 196155777 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0058755 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGATTCAG GCGCTAAAAG CGGCTTGAGT GAGCTTAAGG CAAGATTGTT GTTCGTACTT
GGTGCGATTG TTGTATTCAG ACTAGGTTCT TACGTTCCTA TCCCTGGCAT CGATCCAGCG
GTACTTGCTG ACTTGTTCGA GCAACAAAAA GGCACCATTG TAGAAATGTT CAACATGTTC
TCTGGTGGTG CGCTTGAGCG TGCATCCGTT CTGGCTTTGG GCATTATGCC ATACATTACT
GCATCCATTA TCATGCAGTT GCTCTCGGTG GTTCACCCAC CGATGGTGGA GCTTAAAAAA
GAAGGCGAAG CAGGCCGTCG TAAAATTAGT CAGTACACGC GTTATCTAAC GCTTGTATTG
GCTATCTTCC AATCAATTGG AATTTCGACT GGTTTGCCTA ACCTGATTAA TGGATTGGTG
ATAAACCCTG GCTTCGGATT CTACTTTACG GCAGTAGTGA GCCTAGTCAC AGGAACTATG
TTCCTTATGT GGTTGGGTGA GCAAATTACC GAACGAGGTA TTGGTAACGG TATCTCTATA
TTGATTTTTG CTGGTATTGT TGCCGGTCTG CCAACAGCGA TAGGTCAGAC TGCGGAACAA
GCAAGGCAGG GCGACATTAA CTTGTTGTTC CTACTGTTGA TTGGCGCAAT TGTTATCGCT
CTTACATACC TAGTTGTATT TGTAGAGCGC GGACAGCGCA GAATTGTGGT AAACTACGCA
AAACGTCAGC AAGGCCGTCA GGTTTTTGCT GCGCAAAGCA CCCATTTACC GCTGAAAGTC
AACATTGCTG GTGTAATTCC ACCAATCTTT GCTTCTAGCA TTATTCTGTT CCCGGGTACC
ATCGCAGGAT GGTTCGGACA GAATGAATCA ACAGCGTGGT TGCAAGATGT AGCGCTTATG
CTATCTCCTG GTCAACCGCT GTACGTGATG TTATACGCAG CTGCGATTAT CTTCTTCTGC
TTCTTCTACA CGGCGTTGGT TTTCAACCCG CGTGATACAG CAGATAACTT GAAGAAGTCT
GGCGCGTTCA TCCCAGGCAT CCGCCCGGGT GAGCAAACGT CACGATACAT TGACAAGGTA
ATGACTCGCC TTACACTGGC TGGCGCACTG TACATAACCT TTATTTGTTT AGTGCCTGAA
TTCATGCTAA TTGCTTGGAA TGTGCCGTTC TACTTCGGTG GTACGTCGCT TCTCATTATC
GTAGTAGTTA TCATGGACTT TATGGCACAA GTACAGACAC ATTTGATGTC TAGTCAATAT
GAGTCTGTGC TGAAGAAAGC TAACCTTAAA GGCTACGGCC GATAA
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| Protein sequence | MDSGAKSGLS ELKARLLFVL GAIVVFRLGS YVPIPGIDPA VLADLFEQQK GTIVEMFNMF
SGGALERASV LALGIMPYIT ASIIMQLLSV VHPPMVELKK EGEAGRRKIS QYTRYLTLVL
AIFQSIGIST GLPNLINGLV INPGFGFYFT AVVSLVTGTM FLMWLGEQIT ERGIGNGISI
LIFAGIVAGL PTAIGQTAEQ ARQGDINLLF LLLIGAIVIA LTYLVVFVER GQRRIVVNYA
KRQQGRQVFA AQSTHLPLKV NIAGVIPPIF ASSIILFPGT IAGWFGQNES TAWLQDVALM
LSPGQPLYVM LYAAAIIFFC FFYTALVFNP RDTADNLKKS GAFIPGIRPG EQTSRYIDKV
MTRLTLAGAL YITFICLVPE FMLIAWNVPF YFGGTSLLII VVVIMDFMAQ VQTHLMSSQY
ESVLKKANLK GYGR
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