| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00950 |
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| Symbol | rplE |
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| ID | 6775211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 997765 |
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| End bp | 998304 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754382 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_002125258 |
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| Protein GI | 196155769 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00204623 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATTT CTATAAAGAA ACAGTAGTAG CTGAACTTGC TAAGCAGTTC
GGATACAAAA GCGTCATGCA AGTCCCTCGG ATTGAAAAAA TCACTCTAAA CATGGGTTTA
GGTGAAGCAG TTGCTGACAA AAAGGTACTT GAGAATGCTC AAGCTGACAT GACGGCTATC
GCCGGTCAGA AGCCTGTAGT CACAGTTGCA AGAAAATCAG TAGCGGGTTT TAAAATCCGT
GAAGGTTATC CGATTGGCTG TAAAGTAACC CTACGCGGCG AGCGTATGTG GGAGTTCCTT
GAGCGTTTGA TTTCAATCGC TATTCCACGT GTTCGCGATT TCCGTGGTTT GAATCCTAAA
TCATTCGACG GACGTGGTAA CTACAGCATG GGCGTGCGTG AGCAAATCAT TTTCCCTGAA
ATCGATTTCG ATAAAGTGGA TAAGGTTCGC GGTATGGATA TTACTATCAC TACCAGTGCG
AATACTAATG ACGAAGCACG TGCTCTGCTG GACGCGTTTA ACTTCCCATT CAAAAAGTAG
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| Protein sequence | MAKLHDFYKE TVVAELAKQF GYKSVMQVPR IEKITLNMGL GEAVADKKVL ENAQADMTAI
AGQKPVVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFL ERLISIAIPR VRDFRGLNPK
SFDGRGNYSM GVREQIIFPE IDFDKVDKVR GMDITITTSA NTNDEARALL DAFNFPFKK
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