Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00903 |
Symbol | |
ID | 6779110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 954006 |
End bp | 956045 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754335 |
Product | RecQ domain protein |
Protein accession | YP_002125211 |
Protein GI | 196155722 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCTG CCCCCAATAT TTTACAACAG CTTTTTGGTT TCTCAGCGTT TCGCGAGGGG CAAAAAGAGG CGGTGGATTC TCTACTTAGT GGGCATTCAA CGTTAGCGAT CTTTCCGACT GGTTCGGGCA AATCTTTGTG TTACCAGTTC GTTGCTACGC AGCTGCCACA TTTAACTCTG GTGGTTTCTC CATTACTGGC GCTGATGAAA GATCAGCTAG AATTTTTGCA TAGCAAAGGC ATTGCGGCGG CTAGCATCGA TTCCACCTTA ACACCTGAGC AAAACAAGCA GGTGATGAAC GACGTGCGTT CAGGGCAGTG TAAAATTTTA ATGGTGTCAG TGGAGCGTTT TAAAAACGAA CGGTTCCGAC AATTCATCGA GTCCGTTCAG GTAAGTATGT TGGTGGTCGA TGAAGCGCAC TGTATCTCTG AGTGGGGCCA TAACTTTCGC CCCGACTACT TAAAACTTCC TGCCTACCAA AAAGAGTTGA ATATCCCACT TGTATTACTA CTTACAGCAA CGGCCACTAA AAAAGTAAAA GAAGATATGG CGGCACGCTT TGCTATTGCG CCAACTAGCA TTATTCAAAC GGGATTTTAT CGCCCCAACC TGAATTTATT TGTTCGCCCC GTACTTGAAC CTAACAAAAA TCAAGCGCTG ATAGACGAAA TTCAAAAACA ACAAGGTGCT GGGATTGTTT ACGTTACATT ACAAAATAGC GCAGAGGATG TAGCGCGCTT TTTGCAGCAG CAAGGGTTTG CTGCGAAGGC CTACCATGCA GGCCTTAACA GTGAGGTAAG GCAAGGTATC CAACAAGATT TCATGAGCAA CAAGATTCAA GTCGTTGTAG CTACTATTGC CTTTGGCATG GGTATAGATA AATCTGATAT CCGCTTTGTT ATCCATTACG ATCTACCTAA ATCTATTGAA AACTACAGCC AAGAAATCGG CAGAGGTGGG CGCGATGGCG AAGCGGCAAA TTGCACCGTA TTAGCGAACC TCGACGGATT AGTCACCATA GAAAACTTCG TTTACGGCGA CACACCCGAT AAAAGCGCAA TAGAACGGGT TATCGACGAC ATCAAGCTGC AAGCCCCAGC TGAACAAAAT AGAGCCAAGC AAGTTACACC AAAGCAAGAT AGAGCACAGC AATATACAAC TAATCAAAAT GACTCGCTCA TCAATGCAGA AAACAAGGTT TACCAATGGG AAACCCAAAT AAATAGCTTA TCGAGCGCCA GTAATATTCG CCAGCTTCCT CTTAAAACCT TACTTGTTCA GCTTGAACTC GCAAACGTTA TTCGCCCGTT ATTCGCCTAT TTCGCAGAAT ACAAATTCCG CTTTATTTCA GATAAAGCCA CCATACTCGG CTTGTTTTCA GAAGAGCGAG CGCGCTTTTT AGATGCGGTA TTCACTCATT CAAACATGAA GAAAGTGTGG GGCGTGGTCG ATTTCGACAG TATTTATCAG CACTATGGCG CAGAACGTTC TAGAGTAGTG GCGGCCTTAG AATACTTGCA CGAGCACAAT CATATAGAGC TTGCATCACG TTTAATTACC GATGTATACC GTGTTAACAA CGAATTACTG CAAGACGGCG ATTTGGCAAA CAAACTAGCG CACTATTTTT CTGAAAACGA ACGTAAAGAA GTCGAGCGCA TCGCCGCACT TGTCAGCTTT TTCGAACAAG ACACTTGCTT AAGCCACAAC TTGTCAGCGT ATTTTGATGA TACTCAAGCA CCGAAAGCGT GTGGGCATTG CAGTGTGTGC CAAGGTAAAG TGGCCAAGCT TAACTATTCA TCACCAATCC CAATACCGGA TAGAGAGCAG ATATCTGAAG CTATGACAGC GCTAGAAGCG CATTTAAGCG GTAAGTTTGA AGGCCCAATC ACCCCTTCTA TTTATTGTCG CTTCCTAACT GGCATGACTA TGCCTTTGTT TAGTCGCTTA AAAATAAGAC AAGTTAAAGG GTTTGGTAGC TTGGAACACT GCCGGTATGC AGATGTTTTA CAAGAAGTGA ACGCAGTTTC ATGCCAATGA
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Protein sequence | MSSAPNILQQ LFGFSAFREG QKEAVDSLLS GHSTLAIFPT GSGKSLCYQF VATQLPHLTL VVSPLLALMK DQLEFLHSKG IAAASIDSTL TPEQNKQVMN DVRSGQCKIL MVSVERFKNE RFRQFIESVQ VSMLVVDEAH CISEWGHNFR PDYLKLPAYQ KELNIPLVLL LTATATKKVK EDMAARFAIA PTSIIQTGFY RPNLNLFVRP VLEPNKNQAL IDEIQKQQGA GIVYVTLQNS AEDVARFLQQ QGFAAKAYHA GLNSEVRQGI QQDFMSNKIQ VVVATIAFGM GIDKSDIRFV IHYDLPKSIE NYSQEIGRGG RDGEAANCTV LANLDGLVTI ENFVYGDTPD KSAIERVIDD IKLQAPAEQN RAKQVTPKQD RAQQYTTNQN DSLINAENKV YQWETQINSL SSASNIRQLP LKTLLVQLEL ANVIRPLFAY FAEYKFRFIS DKATILGLFS EERARFLDAV FTHSNMKKVW GVVDFDSIYQ HYGAERSRVV AALEYLHEHN HIELASRLIT DVYRVNNELL QDGDLANKLA HYFSENERKE VERIAALVSF FEQDTCLSHN LSAYFDDTQA PKACGHCSVC QGKVAKLNYS SPIPIPDREQ ISEAMTALEA HLSGKFEGPI TPSIYCRFLT GMTMPLFSRL KIRQVKGFGS LEHCRYADVL QEVNAVSCQ
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