| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00881 |
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| Symbol | |
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| ID | 6778682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 930625 |
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| End bp | 931836 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642754313 |
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| Product | ABC-type branched-chain amino acid transport system, periplasmic component |
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| Protein accession | YP_002125189 |
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| Protein GI | 196155700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCGG CAGATACTAT TAAAGTAGGT GTACTACATT CGCTGTCGGG CACCATGGCA
ATATCAGAAA CAACATTGAA AGACACAGTG TTGATGATGA TTGAAGAACA GAATAAAGCG
GGCGGTATCC TGGGTAAAAA GCTAGAAGCT GTGGTAGTTG ACCCCGCGTC AAACTGGCCG
CTGTTTGCAG AAAAAACTCG GGAGTTACTG GCACAGGAAA AGGTCGATGT GATTTTCGGT
TGCTGGACGT CAGTGTCAAG AAAATCCGTA TTGCCCGTAA TTGAAGAGCT CAACGGCTTG
TTGTTCTACC CTGTGCAATA CGAAGGGGAA GAGTCTTCGA AGAATGTGTT CTACACAGGC
GCAGCGCCTA ACCAGCAAGC TATACCAGCG GTAGATTATT TAATGAATGA TATCGGTGCT
ACTCGTTGGG TTCTAGCAGG AACTGATTAT GTATACCCAC GCACGACAAA CAAGATATTA
AAAGAGTATC TGAATGCGAA AGGCGTTAAA GACGAAGACA TTCTTATTAA CTACACCCCA
TTTGGTCATT CTGACTGGCA AGGTATTGTT TCTGAGATCA AAAAGTTCGG CTCAACAGGC
AAGAAGACTG CTGTGGTTTC TACAATTAAC GGCGATGCGA ACATTCCATT TTACAAAGAA
TTAGGCAACC AAGGCATTTC TGCAGAAGAT ATTCCAGTGG TGGCATTCTC TGTAGGTGAA
GAAGAGCTTT CGGGCTTTGA TGCAGCGCCT CTTGTTGGAC ATCTTGCTGC TTGGAATTAC
TTCCAAAGTG TTGAATCAGA TGAAAATGAT GAATTTATCG AAGGTTGGCA ACGCTACATT
GGTGATGATG AACGTGTAAC GAATGACCCA ATGGAAGCAA CTTATATTGG CTTCAAAATG
TGGGCAAAAG CGGTAGAAAA AGCAGGCACT ACAGATGTAG ACGAAGTAGA GCAAGCGATG
ATCGGTATCG CAGTGCCAAA TCTCACAGGA AGCATTGCAG TTATGAATGC AAACCATCAC
CTATCGAAGC CCGTGCTAAT TGGCGAAATT CAAGAAGATG GTCAATTTGA AGTGGTTTGG
GAAACACCAG ATACAGTGAT TGGTGATGCG TGGTCAGACT TTCTACCGAG TTCAAAAAAC
CTCATGTCGG ACTGGACTGC ACCACTTCGT TGCGGAAATT TTGATGTGAC GACAGGTAAA
TGCTCGGGTT AG
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| Protein sequence | MLAADTIKVG VLHSLSGTMA ISETTLKDTV LMMIEEQNKA GGILGKKLEA VVVDPASNWP
LFAEKTRELL AQEKVDVIFG CWTSVSRKSV LPVIEELNGL LFYPVQYEGE ESSKNVFYTG
AAPNQQAIPA VDYLMNDIGA TRWVLAGTDY VYPRTTNKIL KEYLNAKGVK DEDILINYTP
FGHSDWQGIV SEIKKFGSTG KKTAVVSTIN GDANIPFYKE LGNQGISAED IPVVAFSVGE
EELSGFDAAP LVGHLAAWNY FQSVESDEND EFIEGWQRYI GDDERVTNDP MEATYIGFKM
WAKAVEKAGT TDVDEVEQAM IGIAVPNLTG SIAVMNANHH LSKPVLIGEI QEDGQFEVVW
ETPDTVIGDA WSDFLPSSKN LMSDWTAPLR CGNFDVTTGK CSG
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