| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00668 |
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| Symbol | |
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| ID | 6778874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 693289 |
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| End bp | 695019 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642754103 |
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| Product | DNA ligase |
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| Protein accession | YP_002124980 |
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| Protein GI | 196155491 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.60466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCAT TCAGTAACTT ACTTGAACAG CTTTATTACA CCGCTGGAAC CAAGGCAAAA
GCGCAGCTTA TCGCTGACTA CATTACCAAT ACGCCAGACC CTGACCGCGG CTGGGCCACT
GCCGCTATGG CAGGCACGCT GCGCTTCGAT TTTTTCAAGC GCAATACGGT AAAGAAGCTT
ATTACCGAAC ACACCGACCC CGCCCTTTTT GCCATGAGCT ACGATTATGT CGGTGAAGTG
AGCGAAACCG TGGCCCATTT ATGGCCGCAT AGCGAGCCTA CAGACTCGCT TCCAAGCCTT
ACGGAAGTGG TAGAAACGTT TGCGTCGGTG AGTAAGCAAA AGGTGTCTGA CACCTTGGCC
CATTATCTAA CCATAATGAC CCCTGCCCAG CGCTGGGCGT TACTGAAACT AGGGACGCGC
GGTCTGCGCA TAGGCGTGTC GGCTCGCTCT ATTAAACAAA TACTCGCAGA TTACGGCAAT
AAAGATATCA AGGACATTGA AACCTTATGG CACGCGGTAA CCCCGCCCTA CGTGGATATG
CTTTCATGGC TAGAAGGCAA AGCCGATAAA CCCGATATTG AAAACGCGGT TACTTTTCAC
CCGGTGATGC TTTCCCACCC TATTGAAGAT AGCAACATTG ACGCATTCAC TAAAGACACA
TGGCAAATTG AAAACAAGTA CGACGGCATT CGTGTACAGC TCGTTGTTAA GTCAAATACA
ACCTTTGATG ATAGACACAA TAACAACCGT GCGCCCGATG AAGATCAGCC CGAAAAGGCG
CTCTTCTCTC GGACTGGCGA TGACATCAGC CACTCATTCC CAGACTTACT TGAAACCATA
AATGGCAACA TGGTGCTAGA CGGTGAATTG CTTGTTATCC ATAACGTGGA GGATAGCTAT
GACTCAACCG AAGGCTCAGC TAAAACAAGT GCAAATAATG AGAAAACGCT GAGTGATAAA
AGCGGCTCAC AGGTTTCGCT CGCCACACAG CCGGATGTGG ACACCTTCAA CGCGCTTCAG
CAGCGCCTTA ATAAGAAAAA ACCAAGCAAA GCGCTACAGT CTTCCGCTCC TGTAGGGCTC
ATTGTGTACG ACGCCTTAGT GCTTAATGGT GAGGATCTCA CTGAAAAAAC GTTGAAAGCT
CGGCGCCAAG CCCTTGAAGA GTGGTTTAGC GAAAATAGTA ACAACCGTTT GTTTCTATCA
GAAACCCTTA CCGCTACCTC CCCTCAAAGC CTTCGCAAGC TTCACACCCA AGTTTGCCAA
AACCGTGCGG TTGAAGGGCT GATGATAAAG CGCCTTGATA GTAAGTACAT TCCCGGCCGG
CCGAAGGGCA AGTGGTTTAA GTGGAAGCGC GATCCGCTGG TTGTTGACGC GGTTATGATG
TACGCGCAGC GGGGGCACGG AAAACGTTCA AGCTTCTATT CTGATTACAC CTTTGGCGCA
TGGGAAGACA ACCAGCTACT GCCTATTGGA AAAGCGTACT CCGGGTTCAC TGACGAAGAG
CTTAAGAAGC TTGATAATTG GGTAAGACGC AATGCCGTCG GCCGCTTTGG GCCAGTAAGA
GAAGTAAAAA AAGAACTGGT GCTTGAAGTG GCCTTCGACG CTGCTCACCC TTCATCAAGA
CATAAATCGG GCGTCGCGCT GCGCTTTCCT CGCATTCACC GTATTCGCTG GGACAAGCCC
GCTGATGAAG CTGACACGCT AGCCAACGTG AAAGCCTTGA TAGAGCAATG A
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| Protein sequence | MEAFSNLLEQ LYYTAGTKAK AQLIADYITN TPDPDRGWAT AAMAGTLRFD FFKRNTVKKL
ITEHTDPALF AMSYDYVGEV SETVAHLWPH SEPTDSLPSL TEVVETFASV SKQKVSDTLA
HYLTIMTPAQ RWALLKLGTR GLRIGVSARS IKQILADYGN KDIKDIETLW HAVTPPYVDM
LSWLEGKADK PDIENAVTFH PVMLSHPIED SNIDAFTKDT WQIENKYDGI RVQLVVKSNT
TFDDRHNNNR APDEDQPEKA LFSRTGDDIS HSFPDLLETI NGNMVLDGEL LVIHNVEDSY
DSTEGSAKTS ANNEKTLSDK SGSQVSLATQ PDVDTFNALQ QRLNKKKPSK ALQSSAPVGL
IVYDALVLNG EDLTEKTLKA RRQALEEWFS ENSNNRLFLS ETLTATSPQS LRKLHTQVCQ
NRAVEGLMIK RLDSKYIPGR PKGKWFKWKR DPLVVDAVMM YAQRGHGKRS SFYSDYTFGA
WEDNQLLPIG KAYSGFTDEE LKKLDNWVRR NAVGRFGPVR EVKKELVLEV AFDAAHPSSR
HKSGVALRFP RIHRIRWDKP ADEADTLANV KALIEQ
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