Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00648 |
Symbol | |
ID | 6778725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 672339 |
End bp | 673244 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754083 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_002124960 |
Protein GI | 196155471 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0167326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCTA TTATGGGCCC CACGGCATCA GGCAAAACGG GCTTAGCGCT AGAGATAGCT GCTCAGGTTG AAAGTGAAGT GATCAGTGTC GACTCTGCCC TTGTGTATAA AGGGATGGAC ATTGGTACTG CGAAACCTTC AATCGAAGAG CGCGCAGGAG TGGTACATCA TTTAATTGAC ATTATCGACC CTGCTGAAAG TTATTCAGTG TCGCAATTTG TTAACGATAC AAATCGTTTA ATTGGCGATA TATTAGCGCG TGGCAAGGTA CCAATTTTGG CTGGAGGTAC AATGATGTAC TTCAATGCCT TGATAAATGG TATTTCGCCA CTACCTAAGT CAGATGAAAA GATACGAGAT GAAATAACAC AGCAGGCACA ACGCTTGGGC TGGTCTAAAT TACACGACGA ACTGCGTAGT GTAGACCCGG TTAGCGGTGA GAGAATTCAC CCTAACGATC CACAGCGTAT TACTCGAGCG CTTGAAGTGT ATAGAAACAC CGGCAAAACG TTGACCTATT GGCAGCAGCA AAAGGGCGAA AAGTGCCCTT ACAACATTGC CCAATTTGCC ATCGCGCCCG AAGACCGTGC CGTGTTGCAC AACCGTATTG CTACCCGCTT CGACATGATG TTGGAGCAAG GGTTCGAGAA AGAAGTCGTA AAACTCTACG AACGCAGTGA TCTTCATGAA GATTTACCTT CTATTCGTTC TGTAGGGTAT AGGCAAATGT GGCAGTATTT AGATGGCCAT TTGAGTTACG CAGAAATGCG GGAAAGAGGC ATTATCGCCA CAAGACAACT CGCAAAGCGC CAGCTGACTT GGCTAAGGGG CTGGGAGCAG GTTACGTGGT TAGACACATT TGCTAACGAT AATTTGACTA AAATTACAGC GAAAGTCACA CTTTAA
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Protein sequence | MIAIMGPTAS GKTGLALEIA AQVESEVISV DSALVYKGMD IGTAKPSIEE RAGVVHHLID IIDPAESYSV SQFVNDTNRL IGDILARGKV PILAGGTMMY FNALINGISP LPKSDEKIRD EITQQAQRLG WSKLHDELRS VDPVSGERIH PNDPQRITRA LEVYRNTGKT LTYWQQQKGE KCPYNIAQFA IAPEDRAVLH NRIATRFDMM LEQGFEKEVV KLYERSDLHE DLPSIRSVGY RQMWQYLDGH LSYAEMRERG IIATRQLAKR QLTWLRGWEQ VTWLDTFAND NLTKITAKVT L
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