Gene MADE_00648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00648 
Symbol 
ID6778725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp672339 
End bp673244 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content46% 
IMG OID642754083 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_002124960 
Protein GI196155471 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0167326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCTA TTATGGGCCC CACGGCATCA GGCAAAACGG GCTTAGCGCT AGAGATAGCT 
GCTCAGGTTG AAAGTGAAGT GATCAGTGTC GACTCTGCCC TTGTGTATAA AGGGATGGAC
ATTGGTACTG CGAAACCTTC AATCGAAGAG CGCGCAGGAG TGGTACATCA TTTAATTGAC
ATTATCGACC CTGCTGAAAG TTATTCAGTG TCGCAATTTG TTAACGATAC AAATCGTTTA
ATTGGCGATA TATTAGCGCG TGGCAAGGTA CCAATTTTGG CTGGAGGTAC AATGATGTAC
TTCAATGCCT TGATAAATGG TATTTCGCCA CTACCTAAGT CAGATGAAAA GATACGAGAT
GAAATAACAC AGCAGGCACA ACGCTTGGGC TGGTCTAAAT TACACGACGA ACTGCGTAGT
GTAGACCCGG TTAGCGGTGA GAGAATTCAC CCTAACGATC CACAGCGTAT TACTCGAGCG
CTTGAAGTGT ATAGAAACAC CGGCAAAACG TTGACCTATT GGCAGCAGCA AAAGGGCGAA
AAGTGCCCTT ACAACATTGC CCAATTTGCC ATCGCGCCCG AAGACCGTGC CGTGTTGCAC
AACCGTATTG CTACCCGCTT CGACATGATG TTGGAGCAAG GGTTCGAGAA AGAAGTCGTA
AAACTCTACG AACGCAGTGA TCTTCATGAA GATTTACCTT CTATTCGTTC TGTAGGGTAT
AGGCAAATGT GGCAGTATTT AGATGGCCAT TTGAGTTACG CAGAAATGCG GGAAAGAGGC
ATTATCGCCA CAAGACAACT CGCAAAGCGC CAGCTGACTT GGCTAAGGGG CTGGGAGCAG
GTTACGTGGT TAGACACATT TGCTAACGAT AATTTGACTA AAATTACAGC GAAAGTCACA
CTTTAA
 
Protein sequence
MIAIMGPTAS GKTGLALEIA AQVESEVISV DSALVYKGMD IGTAKPSIEE RAGVVHHLID 
IIDPAESYSV SQFVNDTNRL IGDILARGKV PILAGGTMMY FNALINGISP LPKSDEKIRD
EITQQAQRLG WSKLHDELRS VDPVSGERIH PNDPQRITRA LEVYRNTGKT LTYWQQQKGE
KCPYNIAQFA IAPEDRAVLH NRIATRFDMM LEQGFEKEVV KLYERSDLHE DLPSIRSVGY
RQMWQYLDGH LSYAEMRERG IIATRQLAKR QLTWLRGWEQ VTWLDTFAND NLTKITAKVT
L