| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00568 |
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| Symbol | |
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| ID | 6776976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 600070 |
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| End bp | 601359 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754002 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_002124880 |
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| Protein GI | 196155391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.595668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACTC ACTTAACTGA TACTCATTTT TCCGACCTGC CGATTAACGG CAAGGTTGTT
GACGCGTTAG CGGCAGCTAA TTTTTCACAT TGTACACCAA TTCAAGCACT TGCACTGCCT
CCTTTATTGG AAGGTCACGA CATTGCAGGT CAGGCTCAAA CTGGAACCGG TAAAACCATT
GCCTTTTTGG TGGCTACATT TCACTATTTG CTAAGCAAAG CAGAAAATGC AGATAACAGC
AAATCAAATG GCCCACGCGC TATTATCATG GCGCCAACCA GAGAACTCGC CGTACAAATT
TACAACGACG CCAAACTGCT CAGTGAGCAT ACCGGATTGT CGCTTGGTTT GATTTATGGG
GGCGAAGGAT ACCAAAGTCA ACGTGAAACT TTGGAAGAAG GGGTGGATAT TATAATTGGT
ACGACGGGGC GCATTCTGGA TTATTACAAA CAGAACGTGT TTAGCCTGAA AAATATTCAG
GTTGCCGTAC TTGATGAAGC TGATCGTATG TTCGACTTAG GCTTTATTAA AGATATCCGC
TTTTTATTCC GCCGTATGCC ACCTGCCGGT GAGCGTTTGA GCATGTTGTT CTCTGCAACC
CTGAGCTATC GCGTTCAGGA ACTGGCCTAT GAGCACATGA ATAATCCAAC CCACGTTCAG
GTAGCCCCCG AACAAACAAC TGCCACACGC GTTTCTCAGG AGCTCTTCTA TCCGTCTGAT
GATGACAAGA TGCTGCTGCT TCTTACGCTA CTTGAAGAAG AGTGGCCTGA AAAAGCCATC
GTCTTCGCCA ATACCAAGCA CAGCTGTGAG AAAGTCACTG ATTGGTTAAC CGCAGACGGC
CATCGCGTTG GCTTACTAAG TGGCGATGTA CCACAAAAGA AACGCCTTGG AATTTTAGAA
GACTTCACCA AAGGTAAGTT AGATGTTCTG GTAGCGACAG ACGTTGCTGC TAGAGGTCTA
CACATTGATG CGGTGACACA CGTGTTCAAT TATGACCTAC CCGATGATGC GGAAGACTAC
GTGCATCGTA TTGGTCGTAC TGGTCGTGCC GGACAAAGTG GTATTGCAAT TAGTTTTGCT
TGCGAAAAAT ACGCACTAAA CTTACCTGCT ATTGAGCAAT ACATTCAAAA TGCCATTCCT
GTCACCGATT ATGACAGCAG CGCGCTTCTT GATGATGTAA CCCCTCCTAA ACCACGCAGA
AGACGTACGC CTAACAATCG CAATAGTGCG CGCCGTGGTA ACGGTAGAGG GCGTGGCAAG
CCTCAGCAAC GCAACAACAG AGCGCAATAA
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| Protein sequence | MPTHLTDTHF SDLPINGKVV DALAAANFSH CTPIQALALP PLLEGHDIAG QAQTGTGKTI
AFLVATFHYL LSKAENADNS KSNGPRAIIM APTRELAVQI YNDAKLLSEH TGLSLGLIYG
GEGYQSQRET LEEGVDIIIG TTGRILDYYK QNVFSLKNIQ VAVLDEADRM FDLGFIKDIR
FLFRRMPPAG ERLSMLFSAT LSYRVQELAY EHMNNPTHVQ VAPEQTTATR VSQELFYPSD
DDKMLLLLTL LEEEWPEKAI VFANTKHSCE KVTDWLTADG HRVGLLSGDV PQKKRLGILE
DFTKGKLDVL VATDVAARGL HIDAVTHVFN YDLPDDAEDY VHRIGRTGRA GQSGIAISFA
CEKYALNLPA IEQYIQNAIP VTDYDSSALL DDVTPPKPRR RRTPNNRNSA RRGNGRGRGK
PQQRNNRAQ
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