Gene MADE_00528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00528 
Symbol 
ID6778141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp560954 
End bp562336 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content49% 
IMG OID642753960 
Productargininosuccinate lyase 
Protein accessionYP_002124840 
Protein GI196155351 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTGT GGGGTGGCCG GTTTGAATCC GGTGCAAGTA GTATGTTTAA ACAGGTTAAC 
GACTCGTTGC CGTTCGACCA AGTCATGGCA AGCCAAGACA TTCAAGGCTC GATCAGCTGG
TCACGTGCTT TGCAAAAAGC AGGTGTACTT ACCGCTGATG AACAAGCGCA GCTAGAAGGC
GCGCTTAGTG AGCTAAAAGC GCAAGCAGAT GCCGGTGAAT TAGACTTTAA CGCCTCTAGC
GAAGAAGACA TTCACAGCTT TGTTGAAGCC GCGCTTATCG AGAAGCTTGG CGATATTGGC
CGCAAGCTTC ATACAGGCCG TAGCCGTAAC GACCAGGTAG CCACCGACTT CCGTTTGTGG
GTACGTGAGC ATATTGCTTC ACTTCGCGCT GATGTATTAG GTGTTATTAA ATCACTTCTA
AATGCCGCAA GCCGTCATCA AGAAGCGATT ATTCCAGGTT ATACCCACTT GCAGCGTGCT
CAGCCCATTC ACTTTGCACA CTGGTGCTTA GCGTATGTGG AGATGCTAAA GCGTGATTTA
AGCCGTTTAG ACGACTTAAA AGTACGCATG AACCAGTGCC CCTTAGGCTC TGGTGCACTC
GCAGGCACCA CCTTTCCGGT AGACCGTCAC GCCATTGCAG AAGAGTTGGG GTTTGACTCT
CCTTGCCTAA ACAGCTTGGA TGCGGTGTCC GACAGAGACT TTGTACTTGA ACTGCTGTTT
GTTGCTAGTA CCAGCATGAT GCACTTATCC CGTCTTGCCG AAGACATGAT CTTCTATAAT
TCAGGCGAAG CAGGCTTCCT GCAGCTAGGT GACAGCGTGA CCTCAGGCTC GTCACTGATG
CCGCAAAAGA AAAACCCAGA TGCCCTTGAA CTTATGCGCG GCAAATGCGG GCGCGTATTT
GGCGCCCTAC AAGCACTGCT TGTAACCATG AAAGGCCTCC CTCTTGCGTA TAACAAAGAC
ATGCAAGAAG ACAAAGAAGG CGCTATCGAT ACGGTTAATC AGTGGCACAT TTGTTTGTGT
ATTGCCAGTG AAGTACTCGA TTCACTTCAG CTTAACGAAG AACGCTGTCG TGTAGCAGCG
GCTCAAGGTT TTTCTAATGC TACTGAATTG GCCGACTACT TAGTAGGTAA AGGCGTGCCC
TTTAGAACAG GCCACGACAT TGCTGGGCGC GTAGTGCTTC AGGCCATCGA CAAAGGCTGC
GCTATTGAAG ATTTACCGCT TAGCGACCTG CAAGCTATTA GCGATAAAAT TGAAGACGAC
GTTTACCCAG TATTGCAGCT AGAGTACGGC GTGAACCAAC GCAATATTCT AGGGGGCACC
AGTAAAGAAA CCGTGACGAA AGCTCTGTAT CAAGAGCTGG AAAATTTAGA CAAGCAAGGG
TAG
 
Protein sequence
MALWGGRFES GASSMFKQVN DSLPFDQVMA SQDIQGSISW SRALQKAGVL TADEQAQLEG 
ALSELKAQAD AGELDFNASS EEDIHSFVEA ALIEKLGDIG RKLHTGRSRN DQVATDFRLW
VREHIASLRA DVLGVIKSLL NAASRHQEAI IPGYTHLQRA QPIHFAHWCL AYVEMLKRDL
SRLDDLKVRM NQCPLGSGAL AGTTFPVDRH AIAEELGFDS PCLNSLDAVS DRDFVLELLF
VASTSMMHLS RLAEDMIFYN SGEAGFLQLG DSVTSGSSLM PQKKNPDALE LMRGKCGRVF
GALQALLVTM KGLPLAYNKD MQEDKEGAID TVNQWHICLC IASEVLDSLQ LNEERCRVAA
AQGFSNATEL ADYLVGKGVP FRTGHDIAGR VVLQAIDKGC AIEDLPLSDL QAISDKIEDD
VYPVLQLEYG VNQRNILGGT SKETVTKALY QELENLDKQG