| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00516 |
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| Symbol | |
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| ID | 6777311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 546683 |
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| End bp | 549346 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753948 |
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| Product | bifunctional murein transglycosylase/transpeptidase |
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| Protein accession | YP_002124828 |
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| Protein GI | 196155339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACA TCAAACCACT TATATTATTT AGCTTCCTAT CAGGCCTTAT TGGTGTTGCA
GCACTGGTAG GTATTTACTT TTATATCAAA CCTGACCTAC CAAGTGTTAC TGTACTTAAG
GATGTACGAC TGCAAACACC AATGCAAATA TACACCAAAG ACGGAAAACT TATTTCTCAG
TATGGAGTTA AACGGCGGAT CCCGGTAAAA CTTGAGGAAG TACCTCAAGA ATTAATTGAC
GCCATACTTG CTACCGAAGA CAGTCGCTTC TTTGAACACC ATGGTATTGA CCCCATTGGC
ATTATGCGGG CTGCGGTAAG CTTAGTACTA ACTGGCGAAA AACGTCAGGG CGCAAGTACC
TTGACCATGC AGCTAGCGCG AGGCTTCTTT CTTACTCGTG AAAAAACATA TATCAGAAAG
ATAAAAGAAA TCTTTATTGC TTTACACATG GAGCAGGAGC TTTCTAAACA AGATATTCTC
GAACTCTACC TTAACAAAAT TGAATTAGGC CACAGAGCGT TTGGCTTTGG TGCTGCGGCT
CAGGTGTATT ACGGAAAGCC GCTCAACGAG CTTTCTTTGG CGCAAATAGC TACCATCGCC
GGTCTTCCTA AAGCCCCTTC TGTACTCAAC CCCATTAGTG GGCCCGAGCG GTCAGTGGAA
CGCCGCCGCG TAGTATTGCT GCGTATGCTA GATGAAGAAT ACATTACTAA AGCACAATTT
GATGAAGCAG CGAGTGCGCC TGTTACCGCT AAGAAGCATG GTGCCGAAAT TGAGGTAGAT
GCACCTTATC TCGCCGACAC CATTTACAAC GAAATGGTTG AAATTTACGG GAAGGAAGAG
GCAGAAACCG GTGGGTATCA GGTGTTTGCG ACTGCAACGT CTGAGCTTCA GCTCGCCGCA
CAACGGGCTG TTGTGCGAAA CTTACACGAC TACGACGAGC GTCATGGTTA TAAAGGCCCT
CTTGGTTACT TATGGAATAT CCCTAAGTCC GAGAGTAAAG ATGAAAAAAT CCCTGAACTG
TCATTGAGCT TCGACATAAG CAATAAAACC TCAAGAGATG ACTGGGACAA TACGTCTATT
ATTCGAGTAC TAGAAGAGGT GCCTCACATC AAGCCTCTGA TGCCGTCTGT TGTGACCAAG
GTAGACGAGC AATCTATAGA TGTACTGTCT GTAGATGGTG AAACTCGCAC AATAGCTTGG
GACGGGCTGG ATTGGGCGCG CCGCTACATC ACAGACTTTA GGCAGGGCAG CGACCCTAAA
ACCGCTTCAG ATGTGACCCA AGAAGGGGCT GTTATTTATA TTAGACAGCA AGAAGCACAG
TGGCGTATTT CGCAAATTCC CGAAGTCAGC GGCGCATTTA TCGCGCTTAA TCCAGAAAAC
GGTGCAGTTG AAGCGGTAGT AGGCGGTTAT AGCTTCTATC AAAGTCAGTT CAACCGCGCT
ACCCAGGCTA GGCGTCAAGT GGGTTCGAAT ATCAAGCCGT TTGTGTATTC TGCTGCCATC
AATAGCGGCT ATACCTTAGC GTCCATTATT AACGATGCCC CGATTAATCA GTGGAATGCT
GCTACAGGCG TTGCTTGGCG CCCGCAAAAC TCTCCCGCTG AGTACGACGG GCCAATAAGA
ATGCGTAAGG CGCTTGGTAA GTCTAAAAAC GTAGTGTCGG TTAGACTGTT GCGCGGTGTG
GGGCTGAGAG AAACCGCCGA CTACTTAACC CGTTTTGGCT TTAATAAAGA TGATATTCCA
CTAGATGAAA CGGTATCTTT GGGGTCGAGT TCTCATACAC CGCTTGAAGT GGTAAGAGGC
ATGTCGGTTA TCGCTAACGG CGGTTACTTA GTCAATCCCC ATTTCATCAG TAAAGTGTTG
GATGAAAACG GTGATGAGCT TTGGAAAGCG AACCCCGTGT GGGCGTGTAA TCGTTGTGAA
AGTCAAAGCG AGGCTGAAAT ATTGCCAGAA GATGACGAGG CTGACATTGA AGCCTTGCTT
GCCGCGGAAC TAAATCAAGA CATTATACTT GGCGACGCCG GTGGCGAAGA AGATGCACAG
AAAGTGATCG CCCCTCAAGT TATCACTGCG CAAAACGCCT TCTTAGTGGC GGAAATGATG
CGTACCGCCG TTCGGGCTAA TGGCAATTGG AGTAAGAAAA CCTATTGGTT GGGCACAGGC
TGGCGAGCAC GAAATATACT TCAGCGAACT GACATTGCCG GTAAAACGGG TACTACAAAC
GACTCTCGAG ATACCTGGTT TAGTGGATTC CACAAAGATC TCGTTGCTAC GGCTTGGGTG
GGCTTTGACA ATATGGGTCG GCAGTTGGGT CGCGCCACGC GAAACCAAAA CCTTATAAAC
AAAAATCCAG AAAAATTTAA CTGGATAGGC AATGCACTTA TTGGCACGGA AGACGGCGCT
AAGGCGGCGG GACCGGCGTG GATTAGGTTT ATGCAAAAGG CGTTAAAAGA TAAACCTCAT
ACGCCTATGC CCGTGCCAGA AGATATTGTG CGGGTTCGCA TTGATCGTAC CAGTGGGAAG
TTGACCCGAC GTACAGACCA TACGACACTA TTTGAATATT TCCTGCAAGG CACAGAACCA
ACTACCTATG TTCGCGATGA CGAGGTGCTG GACCCTGCCA CGCAGGATAA AGCGACTGCG
CCAGAGCCAG AAGAAATATT CTAA
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| Protein sequence | MKYIKPLILF SFLSGLIGVA ALVGIYFYIK PDLPSVTVLK DVRLQTPMQI YTKDGKLISQ
YGVKRRIPVK LEEVPQELID AILATEDSRF FEHHGIDPIG IMRAAVSLVL TGEKRQGAST
LTMQLARGFF LTREKTYIRK IKEIFIALHM EQELSKQDIL ELYLNKIELG HRAFGFGAAA
QVYYGKPLNE LSLAQIATIA GLPKAPSVLN PISGPERSVE RRRVVLLRML DEEYITKAQF
DEAASAPVTA KKHGAEIEVD APYLADTIYN EMVEIYGKEE AETGGYQVFA TATSELQLAA
QRAVVRNLHD YDERHGYKGP LGYLWNIPKS ESKDEKIPEL SLSFDISNKT SRDDWDNTSI
IRVLEEVPHI KPLMPSVVTK VDEQSIDVLS VDGETRTIAW DGLDWARRYI TDFRQGSDPK
TASDVTQEGA VIYIRQQEAQ WRISQIPEVS GAFIALNPEN GAVEAVVGGY SFYQSQFNRA
TQARRQVGSN IKPFVYSAAI NSGYTLASII NDAPINQWNA ATGVAWRPQN SPAEYDGPIR
MRKALGKSKN VVSVRLLRGV GLRETADYLT RFGFNKDDIP LDETVSLGSS SHTPLEVVRG
MSVIANGGYL VNPHFISKVL DENGDELWKA NPVWACNRCE SQSEAEILPE DDEADIEALL
AAELNQDIIL GDAGGEEDAQ KVIAPQVITA QNAFLVAEMM RTAVRANGNW SKKTYWLGTG
WRARNILQRT DIAGKTGTTN DSRDTWFSGF HKDLVATAWV GFDNMGRQLG RATRNQNLIN
KNPEKFNWIG NALIGTEDGA KAAGPAWIRF MQKALKDKPH TPMPVPEDIV RVRIDRTSGK
LTRRTDHTTL FEYFLQGTEP TTYVRDDEVL DPATQDKATA PEPEEIF
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